RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 YIPF6Q96EC8 236 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 RNF115Q9Y4L5 304 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 NDUFB6O95139 128 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 IAPPP10997 89 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 CBR1P16152 277 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 NCR3LG1Q68D85 454 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 WDR73Q6P4I2 378 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 LILRB4Q8NHJ6 448 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 PTPMT1Q8WUK0 201 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 RNF133Q8WVZ7 376 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 OCEL1Q9H607 264 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 ADGRL4Q9HBW9 690 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 RCL1Q9Y2P8 373 aaKnown RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 C3orf85A0A1B0GTC6 90 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 GAPDHP04406 335 aaKnown RBP6.32□□□□□ -1.4
CCDC171-201ENST00000380701 OR13C7P0DN81 318 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 VDAC1P21796 283 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 OR3A1P47881 315 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 FAM3AP98173 230 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 PSG6Q00889 435 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 BAK1Q16611 211 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 HYAL4Q2M3T9 481 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 TOR2AQ5JU69 321 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 LIAT1Q6ZQX7 453 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 HSD17B13Q7Z5P4 300 aaPredicted RBP6.32□□□□□ -1.4
CCDC171-201ENST00000380701 OR4Q3Q8NH05 313 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 MISP3Q96FF7 219 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 SLC52A3Q9NQ40 469 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 POMT1Q9Y6A1 747 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 GPANK1O95872 356 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 GABRB1P18505 474 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 ACP1P24666 158 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 ANKRD55Q3KP44 614 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 SPNS3Q6ZMD2 512 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 FA2HQ7L5A8 372 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 DERL3Q96Q80 235 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 ZNF385DQ9H6B1 395 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 STARD10Q9Y365 291 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 DHRS7CA6NNS2 312 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 SPCS3P61009 180 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 SRSF5Q13243 272 aaKnown RBP6.32□□□□□ -1.4
CCDC171-201ENST00000380701 TNXAQ16473 311 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 LAMTOR1Q6IAA8 161 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 DGAT2L7PQ6IED9 249 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 LCN15Q6UWW0 184 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 MOGAT3Q86VF5 341 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 OR4D10Q8NGI6 311 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 OR4C16Q8NGL9 310 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 RBPMSQ93062 196 aaKnown RBP6.32□□□□□ -1.4
CCDC171-201ENST00000380701 OR2D2Q9H210 308 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 COA4Q9NYJ1 87 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 GAB2Q9UQC2 676 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 KCNE3Q9Y6H6 103 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 PRRC2BQ5JSZ5 2229 aaKnown RBP6.32□□□□□ -1.4
CCDC171-201ENST00000380701 IGHV1-45A0A0A0MS14 117 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 G3V3Q6 166 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 TMPRSS2O15393 492 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 CCL3P10147 92 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 GALR1P47211 349 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 MIDNQ504T8 468 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 FNDC7Q5VTL7 733 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 A0A0U1RQV5 110 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 ZC3H12DA2A288 527 aaKnown RBP6.32□□□□□ -1.4
CCDC171-201ENST00000380701 RFPL4AA6NLU0 287 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 RFPL4AL1F8VTS6 287 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 CD160O95971 181 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 BGLAPP02818 100 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 NDUFA6P56556 154 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 RPL30P62888 115 aaKnown RBP6.32□□□□□ -1.4
CCDC171-201ENST00000380701 FAM209BQ5JX69 171 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 OR2I1PQ8NGU4 316 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 CHST5Q9GZS9 411 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 SMOC1Q9H4F8 434 aa6.32□□□□□ -1.4
CCDC171-201ENST00000380701 CTDSPLO15194 276 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 SLC31A2O15432 143 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 SMPD2O60906 423 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 CD96P40200 585 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 AMTP48728 403 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 GNG10P50151 68 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 NUMA1Q14980 2115 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 CCDC71Q8IV32 467 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-201ENST00000380701 ZBTB44Q8NCP5 570 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 SPACA5Q96QH8 159 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 NAA50Q9GZZ1 169 aaKnown RBP6.31□□□□□ -1.4
CCDC171-201ENST00000380701 TMPRSS5Q9H3S3 457 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 ZMAT5Q9UDW3 170 aaKnown RBP6.31□□□□□ -1.4
CCDC171-201ENST00000380701 TCHHQ07283 1943 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 A0A1B0GTH9 108 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 SERTM2A0A1B0GWG4 89 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 PTHLHP12272 177 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 CTLA4P16410 223 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 HLA-DRB3P79483 266 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 RNFT1Q5M7Z0 435 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 R3HDM4Q96D70 268 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 TVP23CQ96ET8 276 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 PHYHIPLQ96FC7 376 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 MANBALQ9NQG1 85 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 LAMB2P55268 1798 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 RGPD4Q7Z3J3 1758 aa6.31□□□□□ -1.4
CCDC171-201ENST00000380701 FAM221AA4D161 298 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms