RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 MMP24Q9Y5R2 645 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 TRIOBPQ9H2D6 2365 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 KIAA1549Q9HCM3 1950 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 TNFSF12O43508 249 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 OR8U8P0C7N1 319 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 RAB5AP20339 215 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 AADACP22760 399 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 LSM6P62312 80 aaKnown RBP7.57□□□□□ -1.2
TRIM6-203ENST00000380107 POLR2GP62487 172 aaKnown RBP eCLIP7.57□□□□□ -1.2
TRIM6-203ENST00000380107 H3F3AP84243 136 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 SHBQ15464 509 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 RAB30Q15771 203 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 FAM189A2Q15884 450 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 RABEPKQ7Z6M1 372 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 TMEM217Q8N7C4 229 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 FGFBP3Q8TAT2 258 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 CRLF2Q9HC73 371 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 LUZP4Q9P127 313 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 RARRES3Q9UL19 164 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 HDGFL3Q9Y3E1 203 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 URGCP-MRPS24S4R325 110 aa7.57□□□□□ -1.2
TRIM6-203ENST00000380107 ZFHX4Q86UP3 3567 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 NSG1A0A0A6YYJ2 146 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 A0A0J9YW62 118 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 NKX2-6A6NCS4 301 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 CLN5O75503 358 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 CST7O76096 145 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 F10P00742 488 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 MT-ND4LP03901 98 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 JMJD7P0C870 316 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 FOLR2P14207 255 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 AGAP20933 346 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 CHATP28329 748 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 NPBWR2P48146 333 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 ZNF239Q16600 458 aaKnown RBP7.56□□□□□ -1.2
TRIM6-203ENST00000380107 HAGHQ16775 308 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 FAM209BQ5JX69 171 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 TMEM123Q8N131 208 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 FADS6Q8N9I5 356 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 ZNF565Q8N9K5 539 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 ZIC4Q8N9L1 334 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 ADPRHL1Q8NDY3 354 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 NTNG2Q96CW9 530 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 MSI2Q96DH6 328 aaKnown RBP7.56□□□□□ -1.2
TRIM6-203ENST00000380107 BORCS8Q96FH0 119 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 EGLN1Q9GZT9 426 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 KCNJ16Q9NPI9 418 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 SEMA5BQ9P283 1151 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 MIOXQ9UGB7 285 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 ST3GAL6Q9Y274 331 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 CHD3Q12873 2000 aaKnown RBP7.56□□□□□ -1.2
TRIM6-203ENST00000380107 IGLV3-32A0A0A0MS00 114 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 BORCS7-ASMTA0A0B4J1R7 106 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 IGHV5-10-1A0A0J9YXX1 117 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 UBE2CO00762 179 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 RRP8O43159 456 aaKnown RBP7.56□□□□□ -1.2
TRIM6-203ENST00000380107 GPR137BO60478 399 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 OR7C1O76099 320 aaPredicted RBP7.56□□□□□ -1.2
TRIM6-203ENST00000380107 YIF1AO95070 293 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 S100A9P06702 114 aaKnown RBP7.56□□□□□ -1.2
TRIM6-203ENST00000380107 CTSSP25774 331 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 P2RY1P47900 373 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 AFF3P51826 1226 aaKnown RBP7.56□□□□□ -1.2
TRIM6-203ENST00000380107 ZNF133P52736 654 aaPredicted RBP7.56□□□□□ -1.2
TRIM6-203ENST00000380107 RUNX1Q01196 453 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 SPIN3Q5JUX0 258 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 ACER2Q5QJU3 275 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 ZNF343Q6P1L6 599 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 SLC23A3Q6PIS1 610 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 LIAT1Q6ZQX7 453 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 YRDCQ86U90 279 aaKnown RBP7.56□□□□□ -1.2
TRIM6-203ENST00000380107 CALHM1Q8IU99 346 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 ZNF561Q8N587 486 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 PIGCQ92535 297 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 CCDC74BQ96LY2 380 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 HS3ST6Q96QI5 342 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 ZNF442Q9H7R0 627 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 PLEKHA2Q9HB19 425 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 CACNA1DQ01668 2161 aa7.56□□□□□ -1.2
TRIM6-203ENST00000380107 DOCK11Q5JSL3 2073 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 A0A0G2JMM0 328 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 A0A1W2PPB8 328 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 A0A1W2PRS3 328 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 IGSF23A1L1A6 192 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 KIR3DP1A8MWS1 328 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 ZNF587BE7ETH6 402 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 ST8SIA3O43173 380 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 SSSCA1O60232 199 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 ZIC3O60481 467 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 DKK1O94907 266 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 SEC11BP0C7V7 166 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 ZNF32P17041 273 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 OTX1P32242 354 aaPredicted RBP7.55□□□□□ -1.2
TRIM6-203ENST00000380107 GLP1RP43220 463 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 RBP2P50120 134 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 ZNF92Q03936 586 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 CXorf66Q5JRM2 361 aaPredicted RBP7.55□□□□□ -1.2
TRIM6-203ENST00000380107 C9orf135Q5VTT2 229 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 CDPF1Q6NVV7 123 aa7.55□□□□□ -1.2
TRIM6-203ENST00000380107 P4HA3Q7Z4N8 544 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms