RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NICN1Q9BSH3 213 aa6.56□□□□□ -1.36
CDKL5-201ENST00000379989 LYRM2Q9NU23 88 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-201ENST00000379989 ELOVL5Q9NYP7 299 aa6.56□□□□□ -1.36
CDKL5-201ENST00000379989 TRBV5-7A0A0A0MS05 114 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 BORCS7-ASMTA0A0B4J1R7 106 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 DEDDO75618 318 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 RPS4Y1P22090 263 aaKnown RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 HNRNPA3P51991 378 aaKnown RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 METAP1P53582 386 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 FAM3BP58499 235 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 BTN3A2P78410 334 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 PMPCAQ10713 525 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 PNRC1Q12796 327 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 ACOT6Q3I5F7 207 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 CST9LP1Q5W188 147 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 SP5Q6BEB4 398 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 BHLHA15Q7RTS1 189 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 OOSP2Q86WS3 158 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 HOGA1Q86XE5 327 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 ZNF709Q8N972 641 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 OR51A4Q8NGJ6 313 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 OR4S2Q8NH73 311 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 ZNRF4Q8WWF5 429 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 DCBLD2Q96PD2 775 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 MCHR1Q99705 422 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 C5orf66Q9H5L9 145 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 A0A0J9YY10 115 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 LILRA5A6NI73 299 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 SEMA4FO95754 770 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 PRRX1P54821 245 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 POM121L1PQ3SYA9 428 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 KIAA2026Q5HYC2 2103 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 SAMD13Q5VXD3 122 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 PLXDC2Q6UX71 529 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 DPPA3Q6W0C5 159 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 Q6ZN92 141 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 NECAP1Q8NC96 275 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 OR11L1Q8NGX0 322 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 ZNF519Q8TB69 540 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 IMMP2LQ96T52 175 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 PHF7Q9BWX1 381 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 PRO3102Q9H379 93 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 UQCR10Q9UDW1 63 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 CES1P1Q9UKY3 287 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 DOCK9Q9BZ29 2069 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 A0A1B0GTH9 108 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 GALR2O43603 387 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 NUDT21O43809 227 aaKnown RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 B3GALT2O43825 422 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 LILRA1O75019 489 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 HYPMO75409 117 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 PPIAL4GP0DN37 164 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 GRPRP30550 384 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 DUSP3P51452 185 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 ZNF92Q03936 586 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 SLAQ13239 276 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 FAM166AQ6J272 317 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 ZNF761Q86XN6 746 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 ZNF417Q8TAU3 575 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 ZNF596Q8TC21 504 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 HOXB13Q92826 284 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 KTI12Q96EK9 354 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-201ENST00000379989 CTDSP1Q9GZU7 261 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 FRRS1LQ9P0K9 344 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 WIPI2Q9Y4P8 454 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 CACNA1IQ9P0X4 2223 aa6.55□□□□□ -1.36
CDKL5-201ENST00000379989 FANCMQ8IYD8 2048 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 TRAV27A0A087WT01 109 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 TRAV34A0A0B4J273 112 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 A0A1W2PRS3 328 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 WIPF3A6NGB9 483 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 SLC17A2O00624 439 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 IGLC2P0DOY2 106 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 IGLC3P0DOY3 106 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 PI3P19957 117 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 TAS2R30P59541 319 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 UBE2NP61088 152 aaKnown RBP6.54□□□□□ -1.36
CDKL5-201ENST00000379989 GGTLC2Q14390 218 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 TCF24Q7RTU0 167 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 OR8G5Q8NG78 346 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 OR51G1Q8NGK1 321 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 OR51A7Q8NH64 312 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 CLDND2Q8NHS1 167 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 FAM3CQ92520 227 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 RERGQ96A58 199 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-201ENST00000379989 TMEM186Q96B77 213 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 ADOQ96SZ5 270 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 TXN2Q99757 166 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 PRSS27Q9BQR3 290 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 SDF2L1Q9HCN8 221 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 CLDND1Q9NY35 253 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 SLC13A4Q9UKG4 626 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 KCNE3Q9Y6H6 103 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 TRANK1O15050 2925 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 A0A1B0GV72 72 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 RNF212BA8MTL3 300 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 SLC25A17O43808 307 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 GNG7O60262 68 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 RCBTB2O95199 551 aa6.54□□□□□ -1.36
CDKL5-201ENST00000379989 MPZL1O95297 269 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms