RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 OR4X1Q8NH49 305 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 FRG2CA6NGY1 282 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 TGFAP01135 160 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 WDTC1Q8N5D0 677 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 VN1R1Q9GZP7 353 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 PSORS1C1Q9UIG5 152 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 DIMT1Q9UNQ2 313 aaKnown RBP11.88□□□□□ -0.51
HIPK3-202ENST00000379016 HCFC2Q9Y5Z7 792 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 DUXBA0A1W2PPF3 345 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 VDAC1P21796 283 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 DYNLT3P51808 116 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 SNRPEP62304 92 aaKnown RBP11.88□□□□□ -0.51
HIPK3-202ENST00000379016 SLC16A11Q8NCK7 471 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 PHLDA3Q9Y5J5 127 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 ARID1AO14497 2285 aa11.88□□□□□ -0.51
HIPK3-202ENST00000379016 SHISA8B8ZZ34 492 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 CD99P14209 185 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 CCR2P41597 374 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 TEX30Q5JUR7 227 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 LHX8Q68G74 356 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 WNT5BQ9H1J7 359 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 SPEF2Q9C093 1822 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 MAP1LC3B2A6NCE7 125 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 BAP18Q8IXM2 172 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 MAP1LC3BQ9GZQ8 125 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 ABCA9Q8IUA7 1624 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 TRAV12-3A0A0B4J271 114 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 TMEM127O75204 238 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 IER3P46695 156 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 TMEM204Q9BSN7 226 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 LINC00470Q9BZP3 86 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
HIPK3-202ENST00000379016 CACNG5Q9UF02 275 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 IGKV3D-20A0A0C4DH25 116 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 B4DEV8 164 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 GABRB1P18505 474 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 GUCA2AQ02747 115 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 CTU2Q2VPK5 515 aaKnown RBP11.87□□□□□ -0.51
HIPK3-202ENST00000379016 LRRC29Q8WV35 223 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 R4GMQ9 66 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 GNG3P63215 75 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 NTNG2Q96CW9 530 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 GPR35Q9HC97 309 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 C1RLQ9NZP8 487 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 OR2W5A6NFC9 320 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 H0Y8X5 98 aa11.87□□□□□ -0.51
HIPK3-202ENST00000379016 POLR2IP36954 125 aaKnown RBP11.87□□□□□ -0.51
HIPK3-202ENST00000379016 MRPL43Q8N983 215 aaKnown RBP11.87□□□□□ -0.51
HIPK3-202ENST00000379016 ISLRO14498 428 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 SLC6A1P30531 599 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 GGTLC2Q14390 218 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 LBHQ53QV2 105 aaPredicted RBP11.86□□□□□ -0.51
HIPK3-202ENST00000379016 TMEM211Q6ICI0 200 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 NKAIN4Q8IVV8 208 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 CBARPQ8N350 705 aaPredicted RBP11.86□□□□□ -0.51
HIPK3-202ENST00000379016 STXBP6Q8NFX7 210 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 WSB1Q9Y6I7 421 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 SMAD7O15105 426 aaKnown RBP11.86□□□□□ -0.51
HIPK3-202ENST00000379016 LDLRAD4O15165 306 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 LDLRAD3Q86YD5 345 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 RPS4Y2Q8TD47 263 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 HDHD3Q9BSH5 251 aaPredicted RBP11.86□□□□□ -0.51
HIPK3-202ENST00000379016 RNF167Q9H6Y7 350 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 HSF4Q9ULV5 492 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 PAGE4O60829 102 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 FAM157CP0CG43 387 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 SLC35B1P78383 322 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 GPNMBQ14956 572 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 ZNF56Q15929 161 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 ABLIM2Q6H8Q1 611 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 A0A1B0GU03 582 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 RPL18Q07020 188 aaKnown RBP11.86□□□□□ -0.51
HIPK3-202ENST00000379016 OR10G8Q8NGN5 311 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 ZIC5Q96T25 663 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 TMEM59LQ9UK28 342 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 ZDHHC8Q9ULC8 765 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 TRDV1A0A1B0GX56 115 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 SRSF10O75494 262 aaKnown RBP11.86□□□□□ -0.51
HIPK3-202ENST00000379016 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 MDP1Q86V88 176 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 TMEM99Q8N816 258 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 KLF16Q9BXK1 252 aaPredicted RBP11.86□□□□□ -0.51
HIPK3-202ENST00000379016 A4GALTQ9NPC4 353 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 AURKAIP1Q9NWT8 199 aaPredicted RBP11.86□□□□□ -0.51
HIPK3-202ENST00000379016 TRBV7-9A0A0J9YWB2 115 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 MALP21145 153 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 ERVFRD-1P60508 538 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 OR1P1Q8NH06 330 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 MCHR2Q969V1 340 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 SOSTQ9BQB4 213 aa11.86□□□□□ -0.51
HIPK3-202ENST00000379016 CLDN34H7C241 214 aa11.85□□□□□ -0.51
HIPK3-202ENST00000379016 SLC25A20O43772 301 aa11.85□□□□□ -0.51
HIPK3-202ENST00000379016 YBX1P67809 324 aaKnown RBP11.85□□□□□ -0.51
HIPK3-202ENST00000379016 NCMAPQ5T1S8 102 aa11.85□□□□□ -0.51
HIPK3-202ENST00000379016 LKAAEAR1Q8TD35 194 aa11.85□□□□□ -0.51
HIPK3-202ENST00000379016 DNASE2BQ8WZ79 361 aa11.85□□□□□ -0.51
HIPK3-202ENST00000379016 GSX2Q9BZM3 304 aa11.85□□□□□ -0.51
HIPK3-202ENST00000379016 IL17CQ9P0M4 197 aa11.85□□□□□ -0.51
HIPK3-202ENST00000379016 KLK11Q9UBX7 282 aa11.85□□□□□ -0.51
HIPK3-202ENST00000379016 C7orf71A4D174 169 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms