RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 IL13RA1P78552 427 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 SNTB1Q13884 538 aaKnown RBP16.73■□□□□ 0.27
SSU72-204ENST00000378726 SLC30A7Q8NEW0 376 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 OR51T1Q8NGJ9 327 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 CASTOR1Q8WTX7 329 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 PLSCR4Q9NRQ2 329 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 MPTX1A8MV57 137 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 K7ENP7 123 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 FUT6P51993 359 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 TSC22D1Q15714 1073 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 GABRA6Q16445 453 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 PAN3Q58A45 887 aaKnown RBP16.73■□□□□ 0.27
SSU72-204ENST00000378726 INO80CQ6PI98 192 aaPredicted RBP16.73■□□□□ 0.27
SSU72-204ENST00000378726 LHFPL2Q6ZUX7 228 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 KCTD9Q7L273 389 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 MRPL21Q7Z2W9 205 aaKnown RBP16.73■□□□□ 0.27
SSU72-204ENST00000378726 CCDC36Q8IYA8 594 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 OR56B1Q8NGI3 324 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 RAB3CQ96E17 227 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 PHYHIPLQ96FC7 376 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 CPNE2Q96FN4 548 aaPredicted RBP16.73■□□□□ 0.27
SSU72-204ENST00000378726 NKX6-2Q9C056 277 aaPredicted RBP16.73■□□□□ 0.27
SSU72-204ENST00000378726 TP53TG5Q9Y2B4 290 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 GTF3C1Q12789 2109 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 OR2AT4A6NND4 320 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 EEF1E1-BLOC1S5C9J1V9 151 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 HRH1P35367 487 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 B2MP61769 119 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 TBR1Q16650 682 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 PLCXD3Q63HM9 321 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 UNQ6126/PRO20091Q6UXV3 157 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 SEM1Q6ZVN7 128 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 ZDHHC22Q8N966 263 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 OR56B2PQ8NGI1 322 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 OR1S2Q8NGQ3 325 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 EXTL1Q92935 676 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 PHB2Q99623 299 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 FN3KRPQ9HA64 309 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 MBD2Q9UBB5 411 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 KLF2Q9Y5W3 355 aaPredicted RBP16.72■□□□□ 0.27
SSU72-204ENST00000378726 ZNF850A8MQ14 1090 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 F5H0A9 414 aaPredicted RBP16.72■□□□□ 0.27
SSU72-204ENST00000378726 AKR1C4P17516 323 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 MPZP25189 248 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 WNT5AP41221 380 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 PLAC9Q5JTB6 97 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 FAM89BQ8N5H3 189 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 THAP6Q8TBB0 222 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 PCDHB10Q9UN67 800 aa16.72■□□□□ 0.27
SSU72-204ENST00000378726 MBD3L4A6NDZ8 208 aaPredicted RBP16.71■□□□□ 0.27
SSU72-204ENST00000378726 MBD3L3A6NE82 208 aaPredicted RBP16.71■□□□□ 0.27
SSU72-204ENST00000378726 MBD3L5A6NJ08 208 aaPredicted RBP16.71■□□□□ 0.27
SSU72-204ENST00000378726 RRP8O43159 456 aaKnown RBP16.71■□□□□ 0.27
SSU72-204ENST00000378726 SPRY1O43609 319 aaPredicted RBP16.71■□□□□ 0.27
SSU72-204ENST00000378726 ANGPTL7O43827 346 aa16.71■□□□□ 0.27
SSU72-204ENST00000378726 TNFSF13O75888 250 aa16.71■□□□□ 0.27
SSU72-204ENST00000378726 VAMP1P23763 118 aa16.71■□□□□ 0.27
SSU72-204ENST00000378726 KRTCAP3Q53RY4 240 aa16.71■□□□□ 0.27
SSU72-204ENST00000378726 MBD3L2Q8NHZ7 208 aaPredicted RBP16.71■□□□□ 0.27
SSU72-204ENST00000378726 STARD4Q96DR4 205 aa16.71■□□□□ 0.27
SSU72-204ENST00000378726 TECTBQ96PL2 329 aa16.71■□□□□ 0.27
SSU72-204ENST00000378726 RTL6Q6ICC9 239 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 ZNF610Q8N9Z0 462 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 METTL9Q9H1A3 318 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 OR51B6Q9H340 312 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 ASF1BQ9NVP2 202 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 KCNK7Q9Y2U2 307 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 PMP2P02689 132 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 ZNF14P17017 642 aaPredicted RBP16.7■□□□□ 0.26
SSU72-204ENST00000378726 TBC1D28Q2M2D7 210 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 FAM180AQ6UWF9 173 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 INO80EQ8NBZ0 244 aaPredicted RBP16.7■□□□□ 0.26
SSU72-204ENST00000378726 ARHGAP5-AS1Q96IT6 56 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 ZNF71Q9NQZ8 489 aaPredicted RBP16.7■□□□□ 0.26
SSU72-204ENST00000378726 PROCRQ9UNN8 238 aa16.7■□□□□ 0.26
SSU72-204ENST00000378726 SSX5O60225 188 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 CELA3BP08861 270 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 GSTP1P09211 210 aaKnown RBP16.69■□□□□ 0.26
SSU72-204ENST00000378726 HOXB1P14653 301 aaPredicted RBP16.69■□□□□ 0.26
SSU72-204ENST00000378726 HIST1H1DP16402 221 aaKnown RBP16.69■□□□□ 0.26
SSU72-204ENST00000378726 AKR1C2P52895 323 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 AKR1C1Q04828 323 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 RSU1Q15404 277 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 OR5L1Q8NGL2 311 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 PAPOLGQ9BWT3 736 aaKnown RBP16.69■□□□□ 0.26
SSU72-204ENST00000378726 PIGMQ9H3S5 423 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 C13orf42A0A1B0GVH6 325 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 WDR1O75083 606 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 HTR3BO95264 441 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 CSTBP04080 98 aaKnown RBP16.69■□□□□ 0.26
SSU72-204ENST00000378726 COX5AP20674 150 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 BLVRBP30043 206 aaPredicted RBP16.69■□□□□ 0.26
SSU72-204ENST00000378726 IDH3GP51553 393 aaPredicted RBP16.69■□□□□ 0.26
SSU72-204ENST00000378726 ASCL4Q6XD76 172 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 MYPOPQ86VE0 399 aaPredicted RBP16.69■□□□□ 0.26
SSU72-204ENST00000378726 OR5AP2Q8NGF4 316 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 TM2D1Q9BX74 207 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 SAV1Q9H4B6 383 aaPredicted RBP16.69■□□□□ 0.26
SSU72-204ENST00000378726 CACNA1GO43497 2377 aa16.69■□□□□ 0.26
SSU72-204ENST00000378726 C5orf51A6NDU8 294 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms