RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 FGFRL1Q8N441 504 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 JAGN1Q8N5M9 183 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 ZNRF1Q8ND25 227 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 FAM192AQ9GZU8 254 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 VCX3AQ9NNX9 186 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 OR14J1Q9UGF5 321 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 STUB1Q9UNE7 303 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 INSIG2Q9Y5U4 225 aa15.54■□□□□ 0.08
SSU72-203ENST00000378725 ZANQ9Y493 2812 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 TRAV1-2A0A0B4J238 106 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 KIR2DS1A0A191URI9 304 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 C22orf46C9J442 243 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 J3QLI3 93 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 SMIM18P0DKX4 95 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 CALCBP10092 127 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 RSU1Q15404 277 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 C1orf100Q5SVJ3 147 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 OR4D6Q8NGJ1 314 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 OR51T1Q8NGJ9 327 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 GFI1Q99684 422 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 FAM234AQ9H0X4 552 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 SLC25A10Q9UBX3 287 aaPredicted RBP15.53■□□□□ 0.08
SSU72-203ENST00000378725 GLS2Q9UI32 602 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 MRPS28Q9Y2Q9 187 aaKnown RBP15.53■□□□□ 0.08
SSU72-203ENST00000378725 ABCA1O95477 2261 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 ABCA2Q9BZC7 2435 aa15.53■□□□□ 0.08
SSU72-203ENST00000378725 IGHV2-70DA0A0C4DH43 119 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 A0A0G2JMP0 313 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 A0A0X1KG70 313 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 K7N7A8 449 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 ZNF780AO75290 641 aaPredicted RBP15.52■□□□□ 0.08
SSU72-203ENST00000378725 ZNF737O75373 536 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 HAND1O96004 215 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 CD36P16671 472 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 LMO1P25800 156 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 COL10A1Q03692 680 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 PAX8Q06710 450 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 GPR176Q14439 515 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 CR1LQ2VPA4 569 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 DCAF12L2Q5VW00 463 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 FAHD2BQ6P2I3 314 aaPredicted RBP15.52■□□□□ 0.08
SSU72-203ENST00000378725 GLIPR1L1Q6UWM5 242 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 BTN2A1Q7KYR7 527 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 LY6G5BQ8NDX9 201 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 OR4M2Q8NGB6 313 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 OR10K1Q8NGX5 313 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 TBC1D15Q8TC07 691 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 ST8SIA4Q92187 359 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 FAHD2AQ96GK7 314 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 DMRTB1Q96MA1 342 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 C1orf147Q96MC9 270 aaPredicted RBP15.52■□□□□ 0.08
SSU72-203ENST00000378725 S100A13Q99584 98 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 TMPRSS13Q9BYE2 586 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 ELL3Q9HB65 397 aaPredicted RBP15.52■□□□□ 0.08
SSU72-203ENST00000378725 PCDHB16Q9NRJ7 776 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 TXNL4BQ9NX01 149 aaKnown RBP15.52■□□□□ 0.08
SSU72-203ENST00000378725 GSTK1Q9Y2Q3 226 aa15.52■□□□□ 0.08
SSU72-203ENST00000378725 CSPG4Q6UVK1 2322 aa15.52■□□□□ 0.07
SSU72-203ENST00000378725 SHISA3A0PJX4 238 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 INAFM1C9JVW0 142 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 SH2D1BO14796 132 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 HTR3BO95264 441 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 TK1P04183 234 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 LIPFP07098 398 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 DUSP1P28562 367 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 PSMD7P51665 324 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 NHLRC3Q5JS37 347 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 C22orf42Q6IC83 251 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 Q6P435 159 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 C8orf46Q8TAG6 207 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 YIPF6Q96EC8 236 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 SNX22Q96L94 193 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 NUDT16L1Q9BRJ7 211 aaKnown RBP15.51■□□□□ 0.07
SSU72-203ENST00000378725 DCTN5Q9BTE1 182 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 SHARPINQ9H0F6 387 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 OR51E2Q9H255 320 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 GHRLQ9UBU3 117 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 RPUSD1Q9UJJ7 312 aaKnown RBP15.51■□□□□ 0.07
SSU72-203ENST00000378725 SSR3Q9UNL2 185 aa15.51■□□□□ 0.07
SSU72-203ENST00000378725 AK6Q9Y3D8 172 aaKnown RBP15.51■□□□□ 0.07
SSU72-203ENST00000378725 TMEM82A0PJX8 343 aa15.5■□□□□ 0.07
SSU72-203ENST00000378725 SLC22A1O15245 554 aa15.5■□□□□ 0.07
SSU72-203ENST00000378725 ENSAO43768 121 aaKnown RBP15.5■□□□□ 0.07
SSU72-203ENST00000378725 CSTBP04080 98 aaKnown RBP15.5■□□□□ 0.07
SSU72-203ENST00000378725 IL13RA2Q14627 380 aa15.5■□□□□ 0.07
SSU72-203ENST00000378725 FAM120AOSQ5T036 256 aa15.5■□□□□ 0.07
SSU72-203ENST00000378725 AWAT2Q6E213 333 aa15.5■□□□□ 0.07
SSU72-203ENST00000378725 BTNL3Q6UXE8 466 aa15.5■□□□□ 0.07
SSU72-203ENST00000378725 C17orf107Q6ZR85 190 aa15.5■□□□□ 0.07
SSU72-203ENST00000378725 OSR2Q8N2R0 312 aa15.5■□□□□ 0.07
SSU72-203ENST00000378725 TMEM185AQ8NFB2 350 aa15.5■□□□□ 0.07
SSU72-203ENST00000378725 MRPS24Q96EL2 167 aaKnown RBP15.5■□□□□ 0.07
SSU72-203ENST00000378725 EXOSC4Q9NPD3 245 aaKnown RBP15.5■□□□□ 0.07
SSU72-203ENST00000378725 OPN4Q9UHM6 478 aa15.5■□□□□ 0.07
SSU72-203ENST00000378725 PSPNO60542 156 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 OR2H2O95918 312 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 AVPP01185 164 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 UBBP0CG47 229 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 GTF2F2P13984 249 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 NDUFB7P17568 137 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms