RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CLDN1O95832 211 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 SP6Q3SY56 376 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 SHEQ5VZ18 495 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 SCCPDHQ8NBX0 429 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 C10orf35Q96D05 121 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 BOD1Q96IK1 185 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 SULT4A1Q9BR01 284 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 GFRA3O60609 400 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 F12P00748 615 aaPredicted RBP12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 DHRS2Q13268 280 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 Q8IYB0 196 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 LRRC75AQ8NAA5 344 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 HSD17B11Q8NBQ5 300 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 OR8U1Q8NH10 309 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 MRPS24Q96EL2 167 aaKnown RBP12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 PLPPR2Q96GM1 343 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 TMPRSS13Q9BYE2 586 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 PRSS50Q9UI38 385 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 CSAG2Q9Y5P2 127 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 A0A1W2PP11 408 aa12.4□□□□□ -0.43
SHROOM1-203ENST00000378679 FAM90A27PA6NNH2 459 aa12.4□□□□□ -0.43
SHROOM1-203ENST00000378679 NKX2-1P43699 371 aaPredicted RBP12.4□□□□□ -0.43
SHROOM1-203ENST00000378679 TMEM108Q6UXF1 575 aa12.4□□□□□ -0.43
SHROOM1-203ENST00000378679 C1orf87Q8N0U7 546 aa12.4□□□□□ -0.43
SHROOM1-203ENST00000378679 PPP1R1CQ8WVI7 109 aa12.4□□□□□ -0.43
SHROOM1-203ENST00000378679 ZNF75AQ96N20 296 aa12.4□□□□□ -0.43
SHROOM1-203ENST00000378679 MPPED1O15442 326 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 GSTZ1O43708 216 aaPredicted RBP12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 IFNA4P05014 189 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 CEACAM1P13688 526 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 ADRA2CP18825 462 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 SNTB1Q13884 538 aaKnown RBP12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 MUC20Q8N307 709 aaPredicted RBP12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 OR10AD1Q8NGE0 317 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 RFESDQ8TAC1 157 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 GPX8Q8TED1 209 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 WDR13Q9H1Z4 485 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 KCNJ16Q9NPI9 418 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 A0A0U1RQV5 110 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 GEMIN2O14893 280 aaKnown RBP12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 ZNF92Q03936 586 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 SEZ6L2Q6UXD5 910 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 CPEB3Q8NE35 698 aaKnown RBP12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 PBDC1Q9BVG4 233 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 CDIPTO14735 213 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 HLA-DQB1P01920 261 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 ADRA2AP08913 450 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 EIF2S3LQ2VIR3 472 aaKnown RBP12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 UNQ9370/PRO34162Q6UXP9 181 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 FAM96BQ9Y3D0 163 aa12.39□□□□□ -0.43
SHROOM1-203ENST00000378679 MED19A0JLT2 244 aaPredicted RBP12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 LRP3O75074 770 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 TGM6O95932 706 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 SNCAP37840 140 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 SUCLG1P53597 346 aaKnown RBP12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 BHLHA15Q7RTS1 189 aaPredicted RBP12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 FADS6Q8N9I5 356 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 OR5AP2Q8NGF4 316 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 TIMP4Q99727 224 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 PIEZO1Q92508 2521 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 FLI1Q01543 452 aaPredicted RBP12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 PPP1R1AQ13522 171 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 RAB31Q13636 194 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 TMEM104Q8NE00 496 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 OR2J1Q9GZK6 312 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 ZNF703Q9H7S9 590 aaPredicted RBP12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 CA10Q9NS85 328 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 ZNF629Q9UEG4 869 aaPredicted RBP12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 CACNA1AO00555 2505 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 ESPL1Q14674 2120 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 KCNAB3O43448 404 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 ENSAO43768 121 aaKnown RBP12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 CYTIPO60759 359 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 NGFP01138 241 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 IGHMP01871 453 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 ZP3P21754 424 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 F2RL1P55085 397 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 KLF3P57682 345 aaPredicted RBP12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 SLC25A40Q8TBP6 338 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 PECRQ9BY49 303 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 FAM206AQ9NX38 181 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 CLDN16Q9Y5I7 305 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 CHD7Q9P2D1 2997 aa12.38□□□□□ -0.43
SHROOM1-203ENST00000378679 FANCMQ8IYD8 2048 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 ZNF705GA8MUZ8 300 aaPredicted RBP12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 NME2P1O60361 137 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 FSTP19883 344 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 ARSJQ5FYB0 599 aaPredicted RBP12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 INO80CQ6PI98 192 aaPredicted RBP12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 C19orf48Q6RUI8 117 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 ZDHHC22Q8N966 263 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 BPIFCQ8NFQ6 507 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 KIF25Q9UIL4 384 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 TRBV5-7A0A0A0MS05 114 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 ISG15P05161 165 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 CALCRP30988 508 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 DEFA6Q01524 100 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 RHEBQ15382 184 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 BATFQ16520 125 aa12.37□□□□□ -0.43
SHROOM1-203ENST00000378679 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms