RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 IGHV4-34P06331 123 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 SELPP16109 830 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 CKS2P33552 79 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 CBARPQ8N350 705 aaPredicted RBP7.84□□□□□ -1.15
LIG3-202ENST00000378526 CNEP1R1Q8N9A8 125 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 SLC25A43Q8WUT9 341 aaPredicted RBP7.84□□□□□ -1.15
LIG3-202ENST00000378526 TCFL5Q9UL49 500 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 ZMIZ1Q9ULJ6 1067 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 PREX1Q8TCU6 1659 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 LOC389332A0A1B0GUA5 103 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 A0A1W2PQM1 296 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 GPR75O95800 540 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 HOXB2P14652 356 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 OR52E5Q8NH55 327 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 A0A0D9SEW6 157 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 GSTZ1O43708 216 aaPredicted RBP7.84□□□□□ -1.15
LIG3-202ENST00000378526 BCL2P10415 239 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 XKR7Q5GH72 579 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 AAED1Q7RTV5 226 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 OR1F12Q8NHA8 337 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 C3orf85A0A1B0GTC6 90 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 FOLR3P41439 243 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 SH2D5Q6ZV89 423 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 Q6ZVL8 140 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 H1FNTQ75WM6 255 aaPredicted RBP7.84□□□□□ -1.15
LIG3-202ENST00000378526 KCND3Q9UK17 655 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 FER1L5A0AVI2 2057 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 PLIN4Q96Q06 1357 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 TRBV23-1A0A0A0MS06 115 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 ZNF815PA8K554 130 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 TBX18O95935 607 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 OPRM1P35372 400 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 POLR2IP36954 125 aaKnown RBP7.84□□□□□ -1.15
LIG3-202ENST00000378526 RBPJQ06330 500 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 SRSF6Q13247 344 aaKnown RBP7.84□□□□□ -1.15
LIG3-202ENST00000378526 FNDC7Q5VTL7 733 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 GDF6Q6KF10 455 aaPredicted RBP7.84□□□□□ -1.15
LIG3-202ENST00000378526 FER1L6-AS2Q96M78 137 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 ST3GAL6Q9Y274 331 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 SPATA31A3Q5VYP0 1347 aa7.84□□□□□ -1.15
LIG3-202ENST00000378526 FURINP09958 794 aa7.84□□□□□ -1.16
LIG3-202ENST00000378526 SEC11AP67812 179 aa7.84□□□□□ -1.16
LIG3-202ENST00000378526 DLEU7Q6UYE1 221 aa7.84□□□□□ -1.16
LIG3-202ENST00000378526 VN1R1Q9GZP7 353 aa7.84□□□□□ -1.16
LIG3-202ENST00000378526 TMED7Q9Y3B3 224 aa7.84□□□□□ -1.16
LIG3-202ENST00000378526 C2orf27AQ580R0 203 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 RBM45Q8IUH3 476 aaKnown RBP7.83□□□□□ -1.16
LIG3-202ENST00000378526 SPATA6Q9NWH7 488 aaPredicted RBP7.83□□□□□ -1.16
LIG3-202ENST00000378526 MYLKQ15746 1914 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 A6NCN8 305 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 IGHEP01854 428 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 PI3P19957 117 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 SSBP2P81877 361 aaPredicted RBP7.83□□□□□ -1.16
LIG3-202ENST00000378526 FMODQ06828 376 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 TMEM255BQ8WV15 326 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 WBP2Q969T9 261 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 CSF3RQ99062 836 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 OR51B2Q9Y5P1 312 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 UBE2L6O14933 153 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 GPX2P18283 190 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 FUT6P51993 359 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 SYPL1Q16563 259 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 C9orf135Q5VTT2 229 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 SLC36A1Q7Z2H8 476 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 LRRC75AQ8NAA5 344 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 KREMEN2Q8NCW0 462 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 MRGPRX4Q96LA9 322 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 PRR14Q9BWN1 585 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 CLN8Q9UBY8 286 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 HEPACAM2A8MVW5 462 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 C10orf128Q5T292 105 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 ZNF770Q6IQ21 691 aaPredicted RBP7.83□□□□□ -1.16
LIG3-202ENST00000378526 LINC00346Q8IVM7 164 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 VKORC1L1Q8N0U8 176 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 PAAF1Q9BRP4 392 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 F11RQ9Y624 299 aaKnown RBP7.83□□□□□ -1.16
LIG3-202ENST00000378526 AKAP6Q13023 2319 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 CTNSO60931 367 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 GCM2O75603 506 aaPredicted RBP7.83□□□□□ -1.16
LIG3-202ENST00000378526 PPP1R17O96001 155 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 RBP4P02753 201 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 TCTN1Q2MV58 587 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 TTC9CQ8N5M4 171 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 HSFX1Q9UBD0 423 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 FAM157CP0CG43 387 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 ORM2P19652 201 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 PGGT1BP53609 377 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 ZDHHC23Q8IYP9 409 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 AQP10Q96PS8 301 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 EPHX3Q9H6B9 360 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 SLC52A3Q9NQ40 469 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 LAMB4A4D0S4 1761 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 ARFGEF2Q9Y6D5 1785 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 OR11H12B2RN74 326 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 GRPP07492 148 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 APOBEC1P41238 236 aaKnown RBP7.83□□□□□ -1.16
LIG3-202ENST00000378526 RPS20P60866 119 aaKnown RBP7.83□□□□□ -1.16
LIG3-202ENST00000378526 KCNAB1Q14722 419 aa7.83□□□□□ -1.16
LIG3-202ENST00000378526 WDR25Q64LD2 544 aaPredicted RBP7.83□□□□□ -1.16
LIG3-202ENST00000378526 DEGS2Q6QHC5 323 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms