RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 CNIH1O95406 144 aa13.3□□□□□ -0.28
NPHP4-201ENST00000378156 MPGP29372 298 aa13.3□□□□□ -0.28
NPHP4-201ENST00000378156 NANOS3P60323 173 aaKnown RBP13.3□□□□□ -0.28
NPHP4-201ENST00000378156 RAB18Q9NP72 206 aa13.3□□□□□ -0.28
NPHP4-201ENST00000378156 RALGAPA2Q2PPJ7 1873 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 TMIGD3P0DMS9 266 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-201ENST00000378156 KLF9Q13886 244 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-201ENST00000378156 SCMH1Q96GD3 660 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 SULT1A3P0DMM9 295 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 SULT1A4P0DMN0 295 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 MOB1BQ7L9L4 216 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 SLC38A6Q8IZM9 456 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 ADPRHL1Q8NDY3 354 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 SF3B5Q9BWJ5 86 aaKnown RBP13.29□□□□□ -0.28
NPHP4-201ENST00000378156 PSENENQ9NZ42 101 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 ZMAT5Q9UDW3 170 aaKnown RBP13.29□□□□□ -0.28
NPHP4-201ENST00000378156 BMP5P22003 454 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 STARD6P59095 220 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 CHST6Q9GZX3 395 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 DEFA4P12838 97 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 FABP4P15090 132 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 CSN1S1P47710 185 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 Q8IYB0 196 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 STPG2Q8N412 459 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 OR4C5Q8NGB2 326 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 OR10X1Q8NGY0 326 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 ZNF721Q8TF20 911 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 ADAT1Q9BUB4 502 aaKnown RBP13.29□□□□□ -0.28
NPHP4-201ENST00000378156 KCNE5Q9UJ90 142 aa13.29□□□□□ -0.28
NPHP4-201ENST00000378156 HSBP1O75506 76 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 KRTDAPP60985 99 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 PDCD11Q14690 1871 aaKnown RBP13.28□□□□□ -0.28
NPHP4-201ENST00000378156 SPAARA0A1B0GVQ0 90 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 ZNF83P51522 516 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 PPP1CBP62140 327 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 SLC25A45Q8N413 288 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 FBXO17Q96EF6 278 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 SLC35B3Q9H1N7 401 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 SF3B6Q9Y3B4 125 aaKnown RBP13.28□□□□□ -0.28
NPHP4-201ENST00000378156 SPRY3O43610 288 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 HIST1H1DP16402 221 aaKnown RBP13.28□□□□□ -0.28
NPHP4-201ENST00000378156 TNFRSF1AP19438 455 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 FPR2P25090 351 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 SOX8P57073 446 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 COTL1Q14019 142 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 MIDNQ504T8 468 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 GALMQ96C23 342 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 ANK1P16157 1881 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 XKRY2A2RUG3 117 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 LYZL6O75951 148 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 PDCD1Q15116 288 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 CD200R1LQ6Q8B3 271 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 ZNF66Q6ZN08 573 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 MRGPREQ86SM8 312 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 PARD6AQ9NPB6 346 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 CLCF1Q9UBD9 225 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 KLHDC2Q9Y2U9 406 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 WSB1Q9Y6I7 421 aa13.28□□□□□ -0.28
NPHP4-201ENST00000378156 CA6P23280 308 aa13.27□□□□□ -0.28
NPHP4-201ENST00000378156 OR3A4PP47883 348 aa13.27□□□□□ -0.28
NPHP4-201ENST00000378156 FOXL2P58012 376 aa13.27□□□□□ -0.28
NPHP4-201ENST00000378156 LSM6P62312 80 aaKnown RBP13.27□□□□□ -0.28
NPHP4-201ENST00000378156 HIST1H3AP68431 136 aa13.27□□□□□ -0.28
NPHP4-201ENST00000378156 ALKBH6Q3KRA9 238 aa13.27□□□□□ -0.28
NPHP4-201ENST00000378156 PCDHGA9Q9Y5G4 932 aaKnown RBP13.27□□□□□ -0.28
NPHP4-201ENST00000378156 SP6Q3SY56 376 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 LGALSLQ3ZCW2 172 aaPredicted RBP13.27□□□□□ -0.29
NPHP4-201ENST00000378156 OR2Z1Q8NG97 314 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 OR13G1Q8NGZ3 307 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 B4E171 279 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 GP1BAP07359 652 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 FCER1GP30273 86 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 TSPAN7P41732 249 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 NHLRC2Q8NBF2 726 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 RAB33BQ9H082 229 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 EFNB2P52799 333 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 SAT2Q96F10 170 aaPredicted RBP13.27□□□□□ -0.29
NPHP4-201ENST00000378156 GINS3Q9BRX5 216 aa13.27□□□□□ -0.29
NPHP4-201ENST00000378156 AKR1C3P42330 323 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 PRDX4Q13162 271 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 DCAF10Q5QP82 559 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 TIPARPQ7Z3E1 657 aaKnown RBP13.26□□□□□ -0.29
NPHP4-201ENST00000378156 CXorf67Q86X51 503 aaPredicted RBP13.26□□□□□ -0.29
NPHP4-201ENST00000378156 C20orf196Q8IYI0 205 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 OR2M3Q8NG83 312 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 OR6S1Q8NH40 331 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 C9orf170A2RU37 121 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 ABCD4O14678 606 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 SMIM6P0DI80 62 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 SLC25A4P12235 298 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 MAGEA5P43359 124 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 GGNBP1Q5YKI7 109 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 MAGT1Q9H0U3 335 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 RCL1Q9Y2P8 373 aaKnown RBP13.26□□□□□ -0.29
NPHP4-201ENST00000378156 RLFQ13129 1914 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 PSME4Q14997 1843 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 G0S2P27469 103 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 RTL8BQ17RB0 113 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 LYPD8Q6UX82 237 aa13.26□□□□□ -0.29
NPHP4-201ENST00000378156 BGLAPP02818 100 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms