RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SULT1B1O43704 296 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 ALX3O95076 343 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 HCKP08631 526 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 PIPP12273 146 aaPredicted RBP13.75□□□□□ -0.21
HMGN4-201ENST00000377575 PRKACAP17612 351 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 RAG2P55895 527 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 EDDM3BP56851 147 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 ERVFRD-1P60508 538 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 MED21Q13503 144 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 ZNF273Q14593 569 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 CCDC58Q4VC31 144 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 MIDNQ504T8 468 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 SHISA2Q6UWI4 295 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 GDPGP1Q6ZNW5 385 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 PARP16Q8N5Y8 322 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 SGMS2Q8NHU3 365 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 RFT1Q96AA3 541 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 SNX22Q96L94 193 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 VCXQ9H320 206 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 HEXA-AS1Q9H8Q6 139 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 RHOFQ9HBH0 211 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 EXOSC1Q9Y3B2 195 aaKnown RBP13.75□□□□□ -0.21
HMGN4-201ENST00000377575 PCDHGB5Q9Y5G0 923 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 NDUFA7O95182 113 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 CCL3L1P16619 93 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 GABRR1P24046 479 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 NPBWR2P48146 333 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 ETV1P50549 477 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 ADARB1P78563 741 aaKnown RBP13.74□□□□□ -0.21
HMGN4-201ENST00000377575 ZNF146Q15072 292 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 HCP5Q6MZN7 132 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 RPL22L1Q6P5R6 122 aaKnown RBP13.74□□□□□ -0.21
HMGN4-201ENST00000377575 SAXO1Q8IYX7 474 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 PNKDQ8N490 385 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 ZSCAN4Q8NAM6 433 aaPredicted RBP13.74□□□□□ -0.21
HMGN4-201ENST00000377575 OR5R1Q8NH85 324 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 PPP1R35Q8TAP8 253 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 SPACA5Q96QH8 159 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 BEX1Q9HBH7 125 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 CHCHD3Q9NX63 227 aaKnown RBP13.74□□□□□ -0.21
HMGN4-201ENST00000377575 C1RLQ9NZP8 487 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 IL36RNQ9UBH0 155 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 VPREB3Q9UKI3 123 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 DIMT1Q9UNQ2 313 aaKnown RBP13.74□□□□□ -0.21
HMGN4-201ENST00000377575 MMP24Q9Y5R2 645 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 HSPE1-MOB4S4R3N1 261 aa13.74□□□□□ -0.21
HMGN4-201ENST00000377575 GPR137BO60478 399 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 KDM4BO94953 1096 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 RBP4P02753 201 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 CD2P06729 351 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 MDKP21741 143 aaPredicted RBP13.73□□□□□ -0.21
HMGN4-201ENST00000377575 OMGP23515 440 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 CAPGP40121 348 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 SNU13P55769 128 aaKnown RBP13.73□□□□□ -0.21
HMGN4-201ENST00000377575 MEF2CQ06413 473 aaPredicted RBP13.73□□□□□ -0.21
HMGN4-201ENST00000377575 EDDM3AQ14507 147 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 CDK5R1Q15078 307 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 GRK1Q15835 563 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 OGFRL1Q5TC84 451 aaPredicted RBP13.73□□□□□ -0.21
HMGN4-201ENST00000377575 C8orf59Q8N0T1 100 aaPredicted RBP13.73□□□□□ -0.21
HMGN4-201ENST00000377575 OR5D18Q8NGL1 313 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 GPR148Q8TDV2 347 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 HMG20AQ9NP66 347 aa13.73□□□□□ -0.21
HMGN4-201ENST00000377575 EXOSC4Q9NPD3 245 aaKnown RBP13.73□□□□□ -0.21
HMGN4-201ENST00000377575 hADV38S2A0JD32 116 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 TMEM82A0PJX8 343 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 SH2D1BO14796 132 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 CASQ2O14958 399 aaPredicted RBP13.72□□□□□ -0.21
HMGN4-201ENST00000377575 MAGEB3O15480 346 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 ZNF728P0DKX0 622 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 RAB3AP20336 220 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 GTF2A1P52655 376 aaPredicted RBP13.72□□□□□ -0.21
HMGN4-201ENST00000377575 KISS1Q15726 138 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 TAF9Q16594 264 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 OR2G6Q5TZ20 316 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 C17orf107Q6ZR85 190 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 BEND2Q8NDZ0 799 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 TAF15Q92804 592 aaKnown RBP eCLIP13.72□□□□□ -0.21
HMGN4-201ENST00000377575 TMEM80Q96HE8 168 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 ZNF714Q96N38 554 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 CHST6Q9GZX3 395 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 GSTK1Q9Y2Q3 226 aa13.72□□□□□ -0.21
HMGN4-201ENST00000377575 IGKV1-12A0A0C4DH73 117 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 C17orf98A8MV24 154 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 MGST3O14880 152 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 IGKV1D-12P01611 117 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 TMEM225BP0DP42 221 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 COX7A1P24310 79 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 DUSP1P28562 367 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 BMXP51813 675 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 DLX6P56179 175 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 LGALS4P56470 323 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 DHRS7BQ6IAN0 325 aaPredicted RBP13.71□□□□□ -0.21
HMGN4-201ENST00000377575 ZNF782Q6ZMW2 699 aaPredicted RBP13.71□□□□□ -0.21
HMGN4-201ENST00000377575 C11orf42Q8N5U0 333 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 OR13D1Q8NGV5 346 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 OR52N1Q8NH53 320 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 RPS4Y2Q8TD47 263 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 RGP1Q92546 391 aaPredicted RBP13.71□□□□□ -0.21
HMGN4-201ENST00000377575 SMIM19Q96E16 107 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms