RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 TM2D1Q9BX74 207 aa10.88□□□□□ -0.67
CBWD3-203ENST00000377344 ZNF581Q9P0T4 197 aa10.88□□□□□ -0.67
CBWD3-203ENST00000377344 NLKQ9UBE8 527 aa10.88□□□□□ -0.67
CBWD3-203ENST00000377344 GLS2Q9UI32 602 aa10.88□□□□□ -0.67
CBWD3-203ENST00000377344 TACC2O95359 2948 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 FBN2P35556 2912 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 TRAV18A0A075B6X5 111 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 PPIAL4EA0A075B759 164 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 OOEPA6NGQ2 149 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 RFPL4AA6NLU0 287 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 OR2AT4A6NND4 320 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 PPIAL4DF5H284 164 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 RFPL4AL1F8VTS6 287 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 SH2D1BO14796 132 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 SCGNO76038 276 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 TFF1P04155 84 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 CHRM2P08172 466 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 PPIAL4FP0DN26 164 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 ZNF44P15621 663 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 CEBPDP49716 269 aaPredicted RBP10.87□□□□□ -0.67
CBWD3-203ENST00000377344 NHLRC3Q5JS37 347 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 RAB12Q6IQ22 244 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 PEG10Q86TG7 708 aaKnown RBP10.87□□□□□ -0.67
CBWD3-203ENST00000377344 CCDC190Q86UF4 302 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 OR10R2Q8NGX6 335 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 RAB3CQ96E17 227 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 PERPQ96FX8 193 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 NEDD4LQ96PU5 975 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 ZMAT3Q9HA38 289 aaKnown RBP10.87□□□□□ -0.67
CBWD3-203ENST00000377344 WIPI2Q9Y4P8 454 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 PPIAL4AQ9Y536 164 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 AKAP6Q13023 2319 aa10.87□□□□□ -0.67
CBWD3-203ENST00000377344 CLDN25C9JDP6 229 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 RAB27BO00194 218 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 SIRPB1O00241 398 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 HSPB6O14558 160 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 DEGS1O15121 323 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 XRCC3O43542 346 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 SSX4O60224 188 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 HAND1O96004 215 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 KNG1P01042 644 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 IGHV4-39P01824 125 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 GABRA2P47869 451 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 ATP5J2P56134 94 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 MRPS11P82912 194 aaKnown RBP10.86□□□□□ -0.67
CBWD3-203ENST00000377344 LSAMPQ13449 338 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 IL13RA2Q14627 380 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 ZNF146Q15072 292 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 Q6ZTK2 550 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 LINC00596Q86U02 117 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A1Q86YD7 464 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 FAM89BQ8N5H3 189 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 PLEKHJ1Q9NW61 149 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 EDARQ9UNE0 448 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 TANC2Q9HCD6 1990 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 CENPEQ02224 2701 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 TRAV38-1A0A0B4J264 116 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 ISPDA4D126 451 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 PPIHO43447 177 aaKnown RBP10.86□□□□□ -0.67
CBWD3-203ENST00000377344 RP2O75695 350 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 PSG2P11465 335 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 MUC1P15941 1255 aaPredicted RBP10.86□□□□□ -0.67
CBWD3-203ENST00000377344 TAS2R20P59543 309 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 MPV17LQ2QL34 196 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 BRICD5Q6PL45 260 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 LINC00299Q6ZSB3 139 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 SNX29P2Q8IUI4 249 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 S100ZQ8WXG8 99 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 ARHGAP5-AS1Q96IT6 56 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 CHODLQ9H9P2 273 aa10.86□□□□□ -0.67
CBWD3-203ENST00000377344 USF3Q68DE3 2245 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 IGKV1D-17A0A075B6S4 117 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 A0A0A6YYH2 397 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 A0A0G2JMP0 313 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 A0A0X1KG70 313 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A10PA6NDY2 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A18PA6NE21 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A16PA6NEW6 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A20PA6NIJ5 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 A6NJ64 397 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A8PA6NJQ4 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A7PA6NKC0 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A22PA8MWA6 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A12PA8MX19 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A5PA8MXJ8 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A23PA8MXZ1 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 LGALS8O00214 317 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 PDCD6O75340 191 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 OR2H2O95918 312 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 GYPAP02724 150 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A15PP0C7V4 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A13PP0C7W8 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A14PP0C7W9 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FAM90A24PP0C7X0 464 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 GNB3P16520 340 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 FUT3P21217 361 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 PRDX2P32119 198 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 MNDAP41218 407 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 TMEM50BP56557 158 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 BTG1P62324 171 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms