RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ZNF251Q9BRH9 671 aa7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 ISYNA1Q9NPH2 558 aa7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 BORCS7-ASMTA0A0B4J1R7 106 aa7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 GEMIN2O14893 280 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 CLDN14O95500 239 aa7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 GYPAP02724 150 aa7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 CPN1P15169 458 aa7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 CD40P25942 277 aa7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 HOXA1P49639 335 aaPredicted RBP7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 RPL11P62913 178 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 RBMS2Q15434 407 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 OR8H3Q8N146 312 aa7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 AUNIPQ9H7T9 357 aa7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 RYDENQ9NUL5 291 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 RBFOX1Q9NWB1 397 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 GHRLQ9UBU3 117 aa7.35□□□□□ -1.23
CRNKL1-202ENST00000377340 SC5DO75845 299 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 ACTBL2Q562R1 376 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 GPR157Q5UAW9 335 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 METTL11BQ5VVY1 283 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 CDH24Q86UP0 819 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 EDARADDQ8WWZ3 215 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 TMEM68Q96MH6 324 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 CNTNAP3Q9BZ76 1288 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 WNT5BQ9H1J7 359 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 FOXJ3Q9UPW0 622 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 TMEM229AB2RXF0 380 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 K7EM74 188 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 CYB5BO43169 146 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 BCL3P20749 454 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 CEACAM6P40199 344 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 RPL31P62899 125 aaKnown RBP7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 TAGLNQ01995 201 aaKnown RBP7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 SMUG1Q53HV7 270 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 IGSF11Q5DX21 431 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 CATSPERDQ86XM0 798 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 DCUN1D4Q92564 292 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 FYTTD1Q96QD9 318 aaKnown RBP7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 CCL19Q99731 98 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 OR5V1Q9UGF6 321 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 FOXD3Q9UJU5 478 aaPredicted RBP7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 J3QT63 122 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 SMPD2O60906 423 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 CTXN2P0C2S0 81 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 DCTDP32321 178 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 PIGYQ3MUY2 71 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 DMKNQ6E0U4 476 aaPredicted RBP7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 DBX2Q6ZNG2 339 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 H2BFWTQ7Z2G1 175 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 SLC7A5P1Q8MH63 180 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 MDS2Q8NDY4 140 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 TRIM63Q969Q1 353 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 PINX1Q96BK5 328 aaKnown RBP7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 SEH1LQ96EE3 360 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 OR51J1Q9H342 316 aa7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 RANBP3Q9H6Z4 567 aaPredicted RBP7.34□□□□□ -1.23
CRNKL1-202ENST00000377340 PIGBOS1A0A0B4J2F0 54 aa7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 SYNGR3O43761 229 aa7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 AESQ08117 197 aa7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 STUMQ69YW2 141 aa7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 SPNS3Q6ZMD2 512 aa7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 OR5A2Q8NGI9 324 aa7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 RNASE6Q93091 150 aaKnown RBP7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 WDR13Q9H1Z4 485 aa7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 GNB4Q9HAV0 340 aa7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 SDHAF2Q9NX18 166 aa7.34□□□□□ -1.24
CRNKL1-202ENST00000377340 CHD7Q9P2D1 2997 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 A0A1W2PPE3 182 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 FABP7O15540 132 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 LMX1BO60663 402 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 PDCD6O75340 191 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 CYB5R3P00387 301 aaPredicted RBP7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 KRASP01116 189 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 PPP3CBP16298 524 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 ACSM1Q08AH1 577 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 ZNF616Q08AN1 781 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 ZNF816Q0VGE8 651 aaPredicted RBP7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 RAB31Q13636 194 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 RPRMLQ8N4K4 120 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 TMEM217Q8N7C4 229 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 MARCH1Q8TCQ1 289 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 ELOVL5Q9NYP7 299 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 SIRT4Q9Y6E7 314 aaPredicted RBP7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 GABARAPH6UMI1 98 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 TXNDC12O95881 172 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 HAND1O96004 215 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 UBE2MP61081 183 aaKnown RBP7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 TATDN3Q17R31 274 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 STEAP3Q658P3 488 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 MINDY2Q8NBR6 621 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 GPX7Q96SL4 187 aaPredicted RBP7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 COMMD5Q9GZQ3 224 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 SLC17A5Q9NRA2 495 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 NUBP2Q9Y5Y2 271 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 FREM1Q5H8C1 2179 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 NUP210Q8TEM1 1887 aaPredicted RBP7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 C5orf42Q9H799 3197 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 IGHV3OR16-10A0A075B7F0 116 aa7.33□□□□□ -1.24
CRNKL1-202ENST00000377340 A0A1W2PP11 408 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms