RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 A0A0B4J2A0 478 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 C9orf170A2RU37 121 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 DPRXA6NFQ7 191 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 MPTX1A8MV57 137 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 TEX46H3BTG2 121 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 TRAF3IP2O43734 574 aaPredicted RBP10.66□□□□□ -0.7
VRK3-202ENST00000377011 DUS4LO95620 317 aaKnown RBP10.66□□□□□ -0.7
VRK3-202ENST00000377011 VAX1Q5SQQ9 334 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 OR10K2Q6IF99 312 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 SLC25A47Q6Q0C1 308 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 AAED1Q7RTV5 226 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 IQCF2Q8IXL9 164 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 ARRDC1Q8N5I2 433 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 WDR31Q8NA23 367 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 CCDC54Q8NEL0 328 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 KCNG3Q8TAE7 436 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 MRPS24Q96EL2 167 aaKnown RBP10.66□□□□□ -0.7
VRK3-202ENST00000377011 ADAT3Q96EY9 351 aaPredicted RBP10.66□□□□□ -0.7
VRK3-202ENST00000377011 ALKBH3Q96Q83 286 aaPredicted RBP10.66□□□□□ -0.7
VRK3-202ENST00000377011 PDCD10Q9BUL8 212 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 EMC6Q9BV81 110 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 C1QTNF6Q9BXI9 259 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 GHRLQ9UBU3 117 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 SHPKQ9UHJ6 478 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 DSCAMO60469 2012 aa10.66□□□□□ -0.7
VRK3-202ENST00000377011 ZFHX3Q15911 3703 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 LMX1BO60663 402 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 IFNA6P05013 189 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 ZNF93P35789 620 aaPredicted RBP10.65□□□□□ -0.7
VRK3-202ENST00000377011 CLDN17P56750 224 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 GRB2P62993 217 aaKnown RBP10.65□□□□□ -0.7
VRK3-202ENST00000377011 CYCSP99999 105 aaKnown RBP10.65□□□□□ -0.7
VRK3-202ENST00000377011 GABRA6Q16445 453 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 HIST3H3Q16695 136 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 DOK3Q7L591 496 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 NAA40Q86UY6 237 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 CHST4Q8NCG5 386 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 TMEM45BQ96B21 275 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 OXGR1Q96P68 337 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 SCGB3A2Q96PL1 93 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.65□□□□□ -0.7
VRK3-202ENST00000377011 LHFPL6Q9Y693 200 aa10.65□□□□□ -0.7
VRK3-202ENST00000377011 RAB19A4D1S5 217 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 ZNF503-AS2A6NEH8 195 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 DBX1A6NMT0 343 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 NUDT19A8MXV4 375 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 SPDEFO95238 335 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 RLN2P04090 185 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 FCER2P06734 321 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 CX3CR1P49238 355 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 IL13RA1P78552 427 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 PPP1R1AQ13522 171 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 ARL6IP1Q15041 203 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 P2RY6Q15077 328 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 HIKESHIQ53FT3 197 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 AWAT2Q6E213 333 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 HOGA1Q86XE5 327 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 OR10K1Q8NGX5 313 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 THAP6Q8TBB0 222 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 FBXW5Q969U6 566 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 MRGPRFQ96AM1 343 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 SF3B5Q9BWJ5 86 aaKnown RBP10.64□□□□□ -0.71
VRK3-202ENST00000377011 CST11Q9H112 138 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 LPAR5Q9H1C0 372 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 NELFAQ9H3P2 528 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 GPR160Q9UJ42 338 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 POLR1DQ9Y2S0 133 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 TRBV6-7A0A0A0MS04 114 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 RNF222A6NCQ9 220 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 POM121CA8CG34 1229 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 LGALS8O00214 317 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 ABCD4O14678 606 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 ALDH3B1P43353 468 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 PRKXP51817 358 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 CARD17Q5XLA6 110 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 CFAP77Q6ZQR2 320 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 ANGPTL5Q86XS5 388 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 OR5AS1Q8N127 324 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 TMEM185AQ8NFB2 350 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 OR4S1Q8NGB4 309 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 OR56B1Q8NGI3 324 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 OR52H1Q8NGJ2 320 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 OR13C9Q8NGT0 318 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 PPP1R1CQ8WVI7 109 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 NKX3-1Q99801 234 aaPredicted RBP10.64□□□□□ -0.71
VRK3-202ENST00000377011 VRK1Q99986 396 aaPredicted RBP10.64□□□□□ -0.71
VRK3-202ENST00000377011 GAL3ST1Q99999 423 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 TMEM204Q9BSN7 226 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 NMES1Q9C002 83 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 ZMAT3Q9HA38 289 aaKnown RBP10.64□□□□□ -0.71
VRK3-202ENST00000377011 UBTD1Q9HAC8 227 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 MRPS28Q9Y2Q9 187 aaKnown RBP10.64□□□□□ -0.71
VRK3-202ENST00000377011 SLC25A15Q9Y619 301 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 MED13LQ71F56 2210 aa10.64□□□□□ -0.71
VRK3-202ENST00000377011 HEATR1Q9H583 2144 aaKnown RBP10.63□□□□□ -0.71
VRK3-202ENST00000377011 OR5H1A6NKK0 313 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 ATP6V1G2-DDX39BF2Z307 99 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 SSX5O60225 188 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 CA11O75493 328 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 HIST1H1DP16402 221 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms