RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 ZBTB37Q5TC79 503 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 TMEM116Q8NCL8 245 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 OR8D4Q8NGM9 314 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 OR13G1Q8NGZ3 307 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 ABHD3Q8WU67 409 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 LPAR5Q9H1C0 372 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 IL17BQ9UHF5 180 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 TTC3P53804 2025 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 CCKARP32238 428 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 C5orf17Q8NAS9 161 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 LINC00615Q96LM1 132 aaPredicted RBP12.16□□□□□ -0.46
COL4A1-201ENST00000375820 MMP26Q9NRE1 261 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 GZMKP49863 264 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 HLXQ14774 488 aaPredicted RBP12.16□□□□□ -0.46
COL4A1-201ENST00000375820 NCMAPQ5T1S8 102 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 PWWP2BQ6NUJ5 590 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 A0A1W2PPE3 182 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 ORM1P02763 201 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 BMI1P35226 326 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 B2MP61769 119 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 ISOC2Q96AB3 205 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 TMEFF2Q9UIK5 374 aaPredicted RBP12.16□□□□□ -0.46
COL4A1-201ENST00000375820 ARRDC5A6NEK1 342 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 PPOXP50336 477 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 FOXO1Q12778 655 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 C12orf73Q69YU5 71 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 TBC1D26Q86UD7 250 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 HSPB2A8KAH6 182 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 CDRT15L2A8MXV6 281 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 S100A8P05109 93 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 UBE2L3P68036 154 aaKnown RBP12.16□□□□□ -0.46
COL4A1-201ENST00000375820 HSPB2Q16082 182 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 THSD4Q6ZMP0 1018 aa12.16□□□□□ -0.46
COL4A1-201ENST00000375820 HPXP02790 462 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 PRRX1P54821 245 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 RNPS1Q15287 305 aaKnown RBP12.15□□□□□ -0.46
COL4A1-201ENST00000375820 SLC16A13Q7RTY0 426 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 OR1K1Q8NGR3 316 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 ANGPTL6Q8NI99 470 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.46
COL4A1-201ENST00000375820 SUMO3P55854 103 aaPredicted RBP12.15□□□□□ -0.46
COL4A1-201ENST00000375820 TMEM108Q6UXF1 575 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 HSD17B13Q7Z5P4 300 aaPredicted RBP12.15□□□□□ -0.46
COL4A1-201ENST00000375820 MOGAT3Q86VF5 341 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 RGP1Q92546 391 aaPredicted RBP12.15□□□□□ -0.46
COL4A1-201ENST00000375820 MYH14Q7Z406 1995 aaKnown RBP12.15□□□□□ -0.46
COL4A1-201ENST00000375820 CDX4O14627 284 aaPredicted RBP12.15□□□□□ -0.46
COL4A1-201ENST00000375820 NDUFB6O95139 128 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 CRYBB2P43320 205 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 MAGEA5P43359 124 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 RNF212Q495C1 297 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 SPSB1Q96BD6 273 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 FXYD1O00168 92 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 CTLA4P16410 223 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 REG1BP48304 166 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 ZNF841Q6ZN19 808 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 RBPMS2Q6ZRY4 209 aaKnown RBP12.15□□□□□ -0.46
COL4A1-201ENST00000375820 WDR13Q9H1Z4 485 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 NAA60Q9H7X0 242 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 FBXL17Q9UF56 701 aa12.15□□□□□ -0.46
COL4A1-201ENST00000375820 CDK2AP1O14519 115 aa12.15□□□□□ -0.47
COL4A1-201ENST00000375820 CST4P01036 141 aa12.15□□□□□ -0.47
COL4A1-201ENST00000375820 SPCS3P61009 180 aa12.15□□□□□ -0.47
COL4A1-201ENST00000375820 PTPMT1Q8WUK0 201 aaPredicted RBP12.15□□□□□ -0.47
COL4A1-201ENST00000375820 ZNF137PP52743 207 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 IQCJQ1A5X6 159 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 OR8B12Q8NGG6 310 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 OR52L2PQ8NGH6 319 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 SLC45A2Q9UMX9 530 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 WNT5AP41221 380 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 FOXL2P58012 376 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 ZNF880Q6PDB4 577 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 SCGB1D4Q6XE38 83 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 OR4D10Q8NGI6 311 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 CT55Q8WUE5 264 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 OR2A5Q96R48 311 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 PECRQ9BY49 303 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 NUP205Q92621 2012 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 LOC389332A0A1B0GUA5 103 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 PLPP3O14495 311 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 TRIP6Q15654 476 aaKnown RBP12.14□□□□□ -0.47
COL4A1-201ENST00000375820 MRPL54Q6P161 138 aaKnown RBP12.14□□□□□ -0.47
COL4A1-201ENST00000375820 BHLHA15Q7RTS1 189 aaPredicted RBP12.14□□□□□ -0.47
COL4A1-201ENST00000375820 PDPNQ86YL7 162 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 Q8IYB0 196 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 GPR27Q9NS67 375 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 A0A1W2PN81 502 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 LILRA5A6NI73 299 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 F2RL2O00254 374 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 RANP62826 216 aaKnown RBP12.14□□□□□ -0.47
COL4A1-201ENST00000375820 CDC20Q12834 499 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 ECSCRQ19T08 205 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 C1QL3Q5VWW1 255 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 MRM1Q6IN84 353 aaKnown RBP12.14□□□□□ -0.47
COL4A1-201ENST00000375820 NTNG2Q96CW9 530 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 LGALS7P47929 136 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 SELENOPP49908 381 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms