RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 LYRM2Q9NU23 88 aaPredicted RBP4.17□□□□□ -1.74
SCN1A-202ENST00000375405 UQCC1Q9NVA1 299 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 MBD5Q9P267 1494 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 A0A0D9SEW6 157 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 KIR2DS1A0A191URI9 304 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM272A0A1B0GTI8 110 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 ACOD1A6NK06 481 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 TEX22C9J3V5 150 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 HCRTO43612 131 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 THY1P04216 161 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 ITGB7P26010 798 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 KIR2DS4P43632 304 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 FUT2Q10981 343 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 KIR2DS1Q14954 304 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 CCL14Q16627 93 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 ZNF658BQ4V348 819 aaPredicted RBP4.17□□□□□ -1.74
SCN1A-202ENST00000375405 RPUSD3Q6P087 351 aaKnown RBP4.17□□□□□ -1.74
SCN1A-202ENST00000375405 GUSBP11Q6P575 273 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 STHQ8IWL8 128 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 OR4A5Q8NH83 315 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 R3HDM4Q96D70 268 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 LINC01587Q99440 93 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 WNT16Q9UBV4 365 aa4.17□□□□□ -1.74
SCN1A-202ENST00000375405 LOC102723996A0A087X1L8 192 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 IGHV3-43A0A0B4J1X8 118 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 GABRPO00591 440 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 ADRA2AP08913 450 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 FGF2P09038 288 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 IGHV3-43DP0DP04 118 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 GNLYP22749 145 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 HOXC5Q00444 222 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 C18orf21Q32NC0 220 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 DUSP28Q4G0W2 176 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 C2orf83Q53S99 150 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 KHDC3LQ587J8 217 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 ZDHHC24Q6UX98 284 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 ANGPTL5Q86XS5 388 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 LOXL4Q96JB6 756 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 LHPPQ9H008 270 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 RPL26L1Q9UNX3 145 aaKnown RBP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 NRASP01111 189 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 KIR2DS5Q14953 304 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 TXNRD3NBQ6F5E7 133 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 LHFPL2Q6ZUX7 228 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 IL23AQ9NPF7 189 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 TEX48A0A1B0GUV7 120 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 A0A1W2PS18 150 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 ZNHIT1O43257 154 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 LEPP41159 167 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 GALNT2Q10471 571 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 BSXQ3C1V8 233 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 EPGNQ6UW88 154 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 DUSP18Q8NEJ0 188 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 OR2T10Q8NGZ9 312 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 REPIN1Q9BWE0 567 aaKnown RBP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 SLC2A11Q9BYW1 496 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 NOX4Q9NPH5 578 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM106BQ9NUM4 274 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 FRRS1LQ9P0K9 344 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 MED13Q9UHV7 2174 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 MUTYHQ9UIF7 546 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 HCFC2Q9Y5Z7 792 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 MN1Q10571 1320 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 COL1A2P08123 1366 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 KIAA1217Q5T5P2 1943 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 TECPR2O15040 1411 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 hADV29S1A0JD25 119 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 PRSS38A1L453 326 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 A8MT66 165 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 PLA2G1BP04054 148 aaKnown RBP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 TCRAP04437 139 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 SNRPCP09234 159 aaKnown RBP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 OR10J1P30954 320 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 TIA1P31483 386 aaKnown RBP eCLIP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 CLDN15P56746 228 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 RIPPLY3P57055 190 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 DMRTC1Q5HYR2 192 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 ZNF691Q5VV52 312 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 ASTLQ6HA08 431 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 Q6ZPB1 254 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 FAM24BQ8N5W8 94 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 OR2V2Q96R30 315 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 NMNAT3Q96T66 252 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 ZNF576Q9H609 170 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 BICRAQ9NZM4 1560 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 GFRA2O00451 464 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 MT-ND6P03923 174 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 CPMP14384 443 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 CEACAM6P40199 344 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 ERVFRD-1P60508 538 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 FOXO1Q12778 655 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 PCLAFQ15004 111 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 PLPPR5Q32ZL2 321 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 TPTE2P1Q5T6R2 138 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 FAHD1Q6P587 224 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 CCBE1Q6UXH8 406 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 RBM45Q8IUH3 476 aaKnown RBP4.16□□□□□ -1.74
SCN1A-202ENST00000375405 CLEC4DQ8WXI8 215 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 MED20Q9H944 212 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 TRIP12Q14669 1992 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms