RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 PBDC1Q9BVG4 233 aa10.66□□□□□ -0.7
NCDN-202ENST00000373243 MRPS17Q9Y2R5 130 aaKnown RBP10.66□□□□□ -0.7
NCDN-202ENST00000373243 C1QL1O75973 258 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 SFT2D2O95562 160 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 S100GP29377 79 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 OTX2P32243 289 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 GUK1Q16774 197 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 LRRC75AQ8NAA5 344 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 TAAR9Q96RI9 348 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 PARD6GQ9BYG4 376 aaPredicted RBP10.65□□□□□ -0.7
NCDN-202ENST00000373243 ADAM19Q9H013 955 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 M0R135 149 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 DFFBO76075 338 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 PGA3P0DJD8 388 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 DUSP1P28562 367 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 DRAM2Q6UX65 266 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 SLC35G3Q8N808 338 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 Q8NFD4 153 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 SLC25A43Q8WUT9 341 aaPredicted RBP10.65□□□□□ -0.7
NCDN-202ENST00000373243 ASB10Q8WXI3 467 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 EDAQ92838 391 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 R3HDM4Q96D70 268 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 ZNF799Q96GE5 643 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 H3BP45 60 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 GSTP1P09211 210 aaKnown RBP10.65□□□□□ -0.7
NCDN-202ENST00000373243 TFPI2P48307 235 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 ZNF684Q5T5D7 378 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 SLC22A25Q6T423 547 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 C16orf54Q6UWD8 224 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 RNF144BQ7Z419 303 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 ZSCAN4Q8NAM6 433 aaPredicted RBP10.65□□□□□ -0.7
NCDN-202ENST00000373243 RTN4IP1Q8WWV3 396 aaPredicted RBP10.65□□□□□ -0.7
NCDN-202ENST00000373243 ST8SIA1Q92185 356 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 ZNF845Q96IR2 970 aaPredicted RBP10.65□□□□□ -0.7
NCDN-202ENST00000373243 OR10C1Q96KK4 312 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 SRPK3Q9UPE1 567 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 RNF24Q9Y225 148 aa10.65□□□□□ -0.7
NCDN-202ENST00000373243 TGIF2-C20orf24A0A0A6YYL0 155 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 TMEM33P57088 247 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 YRDCQ86U90 279 aaKnown RBP10.64□□□□□ -0.71
NCDN-202ENST00000373243 GJC3Q8NFK1 279 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 EMG1Q92979 244 aaKnown RBP10.64□□□□□ -0.71
NCDN-202ENST00000373243 DNAJC4Q9NNZ3 241 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 KCNS2Q9ULS6 477 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 TIMM10BQ9Y5J6 103 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 PLXNA2O75051 1894 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 LMO7DNF2Z398 122 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 BCAT2O15382 392 aaPredicted RBP10.64□□□□□ -0.71
NCDN-202ENST00000373243 CST7O76096 145 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 DXOO77932 396 aaKnown RBP10.64□□□□□ -0.71
NCDN-202ENST00000373243 TRGC1P0CF51 173 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 MSX1P28360 303 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 PTTG1IPP53801 180 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 RPS23P62266 143 aaKnown RBP10.64□□□□□ -0.71
NCDN-202ENST00000373243 UNC119Q13432 240 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 BIVMQ86UB2 503 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 SLC38A9Q8NBW4 561 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 FANCMQ8IYD8 2048 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 DIDO1Q9BTC0 2240 aaKnown RBP10.64□□□□□ -0.71
NCDN-202ENST00000373243 ROS1P08922 2347 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 LRRK1Q38SD2 2015 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 KIAA1671Q9BY89 1806 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 MYO15AQ9UKN7 3530 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 IGHV1OR21-1A0A087WYE8 117 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 CCR5P51681 352 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 RAC1P63000 192 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 MALLQ13021 153 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 LPAL2Q16609 132 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 PRSS54Q6PEW0 395 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 BTNL3Q6UXE8 466 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 ZFP62Q8NB50 900 aaPredicted RBP10.64□□□□□ -0.71
NCDN-202ENST00000373243 ALKBH3Q96Q83 286 aaPredicted RBP10.64□□□□□ -0.71
NCDN-202ENST00000373243 DIRC2Q96SL1 478 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 TUBA4BQ9H853 241 aa10.64□□□□□ -0.71
NCDN-202ENST00000373243 CD37P11049 281 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 MMP16P51512 607 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 TDGF1P3P51864 188 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 ROM1Q03395 351 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 TLE4Q04727 773 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 MST1LQ2TV78 715 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 RNASE8Q8TDE3 154 aaKnown RBP10.63□□□□□ -0.71
NCDN-202ENST00000373243 RNF133Q8WVZ7 376 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 MRPL24Q96A35 216 aaKnown RBP10.63□□□□□ -0.71
NCDN-202ENST00000373243 LPAR5Q9H1C0 372 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 MS4A18H0YCH9 400 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 CHATP28329 748 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 MS4A18Q3C1V0 323 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 ANKRD55Q3KP44 614 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 PLXDC2Q6UX71 529 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 HEPN1Q6WQI6 88 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 MCEMP1Q8IX19 187 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 C11orf42Q8N5U0 333 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 UBALD1Q8TB05 177 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 RPS4Y2Q8TD47 263 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 ADIPOR1Q96A54 375 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 NTNG2Q96CW9 530 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 PRRX2Q99811 253 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 TRANK1O15050 2925 aa10.63□□□□□ -0.71
NCDN-202ENST00000373243 EP300Q09472 2414 aaPredicted RBP10.63□□□□□ -0.71
NCDN-202ENST00000373243 MASP2O00187 686 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms