RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 B3GNTL1Q67FW5 361 aaPredicted RBP10.24□□□□□ -0.77
VCL-202ENST00000372755 Q9N2K0 584 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 COA4Q9NYJ1 87 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 OOEPA6NGQ2 149 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 ACP1P24666 158 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 SKP2Q13309 424 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 FAHD2BQ6P2I3 314 aaPredicted RBP10.23□□□□□ -0.77
VCL-202ENST00000372755 RBPMS2Q6ZRY4 209 aaKnown RBP10.23□□□□□ -0.77
VCL-202ENST00000372755 C5orf17Q8NAS9 161 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 OR6X1Q8NH79 312 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 FAHD2AQ96GK7 314 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 NAT8Q9UHE5 227 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 UFC1Q9Y3C8 167 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 SURF2Q15527 256 aaPredicted RBP10.23□□□□□ -0.77
VCL-202ENST00000372755 RASL11BQ9BPW5 248 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 ZNF426Q9BUY5 554 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 ITGBL1O95965 494 aaPredicted RBP10.23□□□□□ -0.77
VCL-202ENST00000372755 EPHA8P29322 1005 aaPredicted RBP10.23□□□□□ -0.77
VCL-202ENST00000372755 HLA-DRB3P79483 266 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 GAMTQ14353 236 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 C9orf50Q5SZB4 431 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 FAM78BQ5VT40 261 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 FOXB2Q5VYV0 432 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 R3HDM4Q96D70 268 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 SF3B5Q9BWJ5 86 aaKnown RBP10.23□□□□□ -0.77
VCL-202ENST00000372755 CNTD2Q9H8S5 307 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 SIRT3Q9NTG7 399 aaPredicted RBP10.23□□□□□ -0.77
VCL-202ENST00000372755 AP5S1Q9NUS5 200 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 TRDCB7Z8K6 153 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 C3orf80F5H4A9 247 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 M0R143 59 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 CRISP2P16562 243 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 GALNSP34059 522 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 PSMB2P49721 201 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 PNRC1Q12796 327 aaPredicted RBP10.23□□□□□ -0.77
VCL-202ENST00000372755 ZNF770Q6IQ21 691 aaPredicted RBP10.23□□□□□ -0.77
VCL-202ENST00000372755 ASCL5Q7RTU5 278 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 ANAPC16Q96DE5 110 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 CTSVO60911 334 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 P2RY1P47900 373 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 SPINK9Q5DT21 86 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 C10orf35Q96D05 121 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 GABRG3Q99928 467 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 GPR87Q9BY21 358 aa10.23□□□□□ -0.77
VCL-202ENST00000372755 ANKRD36CQ5JPF3 1778 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 CDX4O14627 284 aaPredicted RBP10.22□□□□□ -0.77
VCL-202ENST00000372755 PRSS1P07477 247 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 NKG7Q16617 165 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 DUSP18Q8NEJ0 188 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 ASB10Q8WXI3 467 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 PTP4A1Q93096 173 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 PERPQ96FX8 193 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 STARD10Q9Y365 291 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 MYH9P35579 1960 aaKnown RBP10.22□□□□□ -0.77
VCL-202ENST00000372755 NXPH1P58417 271 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 C11orf91Q3C1V1 193 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 TMEM191AQ9H0A3 160 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 KCNMB2Q9Y691 235 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 GSTZ1O43708 216 aaPredicted RBP10.22□□□□□ -0.77
VCL-202ENST00000372755 STAG3L2P0CL84 134 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 CDKN2AP42771 156 aaKnown RBP10.22□□□□□ -0.77
VCL-202ENST00000372755 PMS2P11Q13670 270 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 SLIRPQ9GZT3 109 aaKnown RBP10.22□□□□□ -0.77
VCL-202ENST00000372755 DEDDO75618 318 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 OPN1MWP04001 364 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 OPN1MW2P0DN77 364 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 OPN1MW3P0DN78 364 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 PPOXP50336 477 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 WNT3P56703 355 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 TRIP6Q15654 476 aaKnown RBP10.22□□□□□ -0.77
VCL-202ENST00000372755 IFT22Q9H7X7 185 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 FBXL17Q9UF56 701 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 TOPAZ1Q8N9V7 1692 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 IGSF23A1L1A6 192 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 M0R2Z0 102 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 SULT1A2P50226 295 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 HOXA4Q00056 320 aaPredicted RBP10.22□□□□□ -0.77
VCL-202ENST00000372755 RIGQ13278 110 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 COL19A1Q14993 1142 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 BET1LQ9NYM9 111 aa10.22□□□□□ -0.77
VCL-202ENST00000372755 ANKRD20A5PA0PJZ0 165 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 CRXO43186 299 aaPredicted RBP10.21□□□□□ -0.77
VCL-202ENST00000372755 TNFSF14O43557 240 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 GNG7O60262 68 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 CAMPP49913 170 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 RAC3P60763 192 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 NUBPLQ8TB37 319 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 SLC6A13Q9NSD5 602 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 SIRT5Q9NXA8 310 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 LPAR3Q9UBY5 353 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 AHDC1Q5TGY3 1603 aaPredicted RBP10.21□□□□□ -0.77
VCL-202ENST00000372755 C5orf52A6NGY3 159 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 LHX8Q68G74 356 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 OR8D4Q8NGM9 314 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 WASHC3Q9Y3C0 194 aa10.21□□□□□ -0.77
VCL-202ENST00000372755 ASPDHA6ND91 283 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 GPR27Q9NS67 375 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 MAST2Q6P0Q8 1798 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 ELOA3CA0A087WX78 387 aaPredicted RBP10.21□□□□□ -0.78
VCL-202ENST00000372755 A0A1W2PQD3 144 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms