RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 EMG1Q92979 244 aaKnown RBP12.13□□□□□ -0.47
LDB3-204ENST00000372066 C14orf79Q96F83 325 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 FXYD6Q9H0Q3 95 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 PPA2Q9H2U2 334 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 LDAHQ9H6V9 325 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 GLRX2Q9NS18 164 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 PLEKHJ1Q9NW61 149 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 AUP1Q9Y679 476 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 PCNX1Q96RV3 2341 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A10PA6NDY2 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A18PA6NE21 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A16PA6NEW6 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A20PA6NIJ5 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A8PA6NJQ4 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A7PA6NKC0 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A22PA8MWA6 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A12PA8MX19 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A5PA8MXJ8 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A23PA8MXZ1 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 ARPC5O15511 151 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A15PP0C7V4 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A13PP0C7W8 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A14PP0C7W9 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 FAM90A24PP0C7X0 464 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 TLE4Q04727 773 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 ZNF345Q14585 488 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 CHRFAM7AQ494W8 412 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 PLCXD3Q63HM9 321 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 MEX3BQ6ZN04 569 aaKnown RBP12.12□□□□□ -0.47
LDB3-204ENST00000372066 C17orf107Q6ZR85 190 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 MOB3CQ70IA8 216 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 TMUB2Q71RG4 321 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 SAXO1Q8IYX7 474 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 OSR2Q8N2R0 312 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 CPEB3Q8NE35 698 aaKnown RBP12.12□□□□□ -0.47
LDB3-204ENST00000372066 MARCH1Q8TCQ1 289 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 DMRTA2Q96SC8 542 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 PDCD10Q9BUL8 212 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
LDB3-204ENST00000372066 COQ3Q9NZJ6 369 aa12.12□□□□□ -0.47
LDB3-204ENST00000372066 F8P00451 2351 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 IGKV1-27A0A075B6S5 117 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 A0A0D9SG52 128 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 FIGNL2A6NMB9 653 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 J3QW42 95 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 SS18L1O75177 396 aaPredicted RBP12.11□□□□□ -0.47
LDB3-204ENST00000372066 B3GALNT1O75752 331 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 GABRR1P24046 479 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 MPGP29372 298 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 CYCSP99999 105 aaKnown RBP12.11□□□□□ -0.47
LDB3-204ENST00000372066 SORDQ00796 357 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 PDZK1IP1Q13113 114 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 C6orf183Q5T699 404 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 RFPL4BQ6ZWI9 263 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 OVCH2Q7RTZ1 564 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 RTN4RL2Q86UN3 420 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 OR8H3Q8N146 312 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 WDYHV1Q96HA8 205 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 DHRS9Q9BPW9 319 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 EHFQ9NZC4 300 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 KIF25Q9UIL4 384 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 CSMD2Q7Z408 3487 aa12.11□□□□□ -0.47
LDB3-204ENST00000372066 ANKRD17O75179 2603 aaKnown RBP12.1□□□□□ -0.47
LDB3-204ENST00000372066 LOC100509620A0A075B734 347 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 OR5H14A6NHG9 310 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 DBX1A6NMT0 343 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 SFT2D2O95562 160 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 CST4P01036 141 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 IGHV3-9P01782 118 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 VAMP1P23763 118 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 CHATP28329 748 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 HLXQ14774 488 aaPredicted RBP12.1□□□□□ -0.47
LDB3-204ENST00000372066 ESCO2Q56NI9 601 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 MRPL21Q7Z2W9 205 aaKnown RBP12.1□□□□□ -0.47
LDB3-204ENST00000372066 Q8NFD4 153 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 COQ8AQ8NI60 647 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 FAM57AQ8TBR7 257 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 ST6GALNAC5Q9BVH7 336 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 GSX2Q9BZM3 304 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 MFFQ9GZY8 342 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 FN3KRPQ9HA64 309 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 CCDC168Q8NDH2 2452 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 FREM1Q5H8C1 2179 aa12.1□□□□□ -0.47
LDB3-204ENST00000372066 TRAV14DV4A0A0A6YYC5 116 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 RPS10-NUDT3A0A1W2PQS6 291 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 SLC22A20A6NK97 555 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 SPRY1O43609 319 aaPredicted RBP12.09□□□□□ -0.47
LDB3-204ENST00000372066 OR2F2O95006 317 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 IGHG3P01860 377 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 AKR1C4P17516 323 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 ARPC4P59998 168 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 OR2F1Q13607 317 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 C11orf87Q6NUJ2 197 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 C6orf201Q7Z4U5 140 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 ADAD2Q8NCV1 583 aaKnown RBP12.09□□□□□ -0.47
LDB3-204ENST00000372066 OR1K1Q8NGR3 316 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 OR6K3Q8NGY3 331 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 OR13G1Q8NGZ3 307 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 PIGCQ92535 297 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms