RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ACKR3P25106 362 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 LMO1P25800 156 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 LAP3P28838 519 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 FCGR2CP31995 323 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 TMEM50BP56557 158 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 AWAT1Q58HT5 328 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 DNLZQ5SXM8 178 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 RPUSD3Q6P087 351 aaKnown RBP9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 SLC16A13Q7RTY0 426 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 OR5AS1Q8N127 324 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 CCDC54Q8NEL0 328 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 OR8G5Q8NG78 346 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 OR13C9Q8NGT0 318 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 FNDC9Q8TBE3 224 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 SSC4DQ8WTU2 575 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 ROBO4Q8WZ75 1007 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 SNRNP40Q96DI7 357 aaKnown RBP9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 GINS3Q9BRX5 216 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 NICN1Q9BSH3 213 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 SCRT1Q9BWW7 348 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 TTTY12Q9BZ98 90 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 OR10A2Q9H208 303 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 FBXL17Q9UF56 701 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 BOKQ9UMX3 212 aaPredicted RBP9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 NSG2Q9Y328 171 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 DMRT1Q9Y5R6 373 aa9.97□□□□□ -0.81
TSPAN1-201ENST00000372003 A0A1W2PNV4 684 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 ZNF878C9JN71 531 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 SOCS1O15524 211 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 HTR3BO95264 441 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 RFPL3SP0C7P2 107 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 NAT2P11245 290 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 APOBEC1P41238 236 aaKnown RBP9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 S100A10P60903 97 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 HSF1Q00613 529 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 FOXO1Q12778 655 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 ARFRP1Q13795 201 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 GUK1Q16774 197 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 RNFT1Q5M7Z0 435 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 THEM4Q5T1C6 240 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 OTPQ5XKR4 325 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 FAM180AQ6UWF9 173 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 RBMS3Q6XE24 437 aaKnown RBP9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 DOK3Q7L591 496 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 LINC00346Q8IVM7 164 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 SGPP2Q8IWX5 399 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 WDSUB1Q8N9V3 476 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 PNLDC1Q8NA58 520 aaKnown RBP9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 ZFP62Q8NB50 900 aaPredicted RBP9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 SECTM1Q8WVN6 248 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 C11orf40Q8WZ69 217 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 S100A13Q99584 98 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 NAA11Q9BSU3 229 aaPredicted RBP9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 TM2D1Q9BX74 207 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 CHST11Q9NPF2 352 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 SDHAF3Q9NRP4 125 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 MIOXQ9UGB7 285 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 RPH3AQ9Y2J0 694 aaPredicted RBP9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 AMDHD2Q9Y303 409 aa9.96□□□□□ -0.81
TSPAN1-201ENST00000372003 TRAV20A0A0B4J274 112 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 ANKUB1A6NFN9 424 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 LRRC3CA6NJW4 275 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 ZNF729A6NN14 1252 aaPredicted RBP9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 GPR137BO60478 399 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 TRAPPC6AO75865 159 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 WISP2O76076 250 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 OR8U9P0C7N5 309 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 SNU13P55769 128 aaKnown RBP9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 TMEM33P57088 247 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 CD81P60033 236 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 CSNK2A1P68400 391 aaPredicted RBP9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 C17orf67Q0P5P2 114 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 IAH1Q2TAA2 248 aaPredicted RBP9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 IGSF11Q5DX21 431 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 POMZP3Q6PJE2 187 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 LRRC18Q8N456 261 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 ADPRHL1Q8NDY3 354 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 CSNK2A3Q8NEV1 391 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 OR8U1Q8NH10 309 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 RNF138Q8WVD3 245 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 DEFB127Q9H1M4 99 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 OPA3Q9H6K4 179 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 UNKLQ9H9P5 680 aaKnown RBP9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 PLA2G2EQ9NZK7 142 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 GSKIPQ9P0R6 139 aa9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 KMT2BQ9UMN6 2715 aaPredicted RBP9.96□□□□□ -0.82
TSPAN1-201ENST00000372003 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 CRYM-AS1A6NIL9 109 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 ADAM10O14672 748 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 RAD51DO75771 328 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 CRYABP02511 175 aaKnown RBP9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 SFTPBP07988 381 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 OR8U8P0C7N1 319 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 GDF1P27539 372 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 MAGEA5P43359 124 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 P2RY1P47900 373 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 RAB2AP61019 212 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 KCNMB1Q16558 191 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 ZNF843Q8N446 348 aa9.95□□□□□ -0.82
TSPAN1-201ENST00000372003 TMEM251Q8N6I4 163 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms