RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 MEOX1P50221 254 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 OR2B8PP59922 312 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 ATPAF1Q5TC12 328 aaPredicted RBP11.13□□□□□ -0.63
GPC3-201ENST00000370818 C1QL2Q7Z5L3 287 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 OR2AE1Q8NHA4 323 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 NPRL2Q8WTW4 380 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 CYYR1Q96J86 154 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 SLC25A21Q9BQT8 299 aaPredicted RBP11.13□□□□□ -0.63
GPC3-201ENST00000370818 ZNF318Q5VUA4 2279 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 CDRT15L2A8MXV6 281 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 MFNGO00587 321 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 SCGNO76038 276 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 YIF1AO95070 293 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 MPIG6BO95866 241 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 GSK3AP49840 483 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 PLGLB1Q02325 96 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 SLC22A6Q4U2R8 563 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 PLAC9Q5JTB6 97 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 GVQW1Q8N7I0 195 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 OR5D18Q8NGL1 313 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 KCNG3Q8TAE7 436 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 FNDC9Q8TBE3 224 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 PP6455Q8WZ26 134 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 MALSU1Q96EH3 234 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 NEU1Q99519 415 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 GPER1Q99527 375 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 OR2H1Q9GZK4 316 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 WNT5BQ9H1J7 359 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 OR10A2Q9H208 303 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 BANF2Q9H503 90 aa11.13□□□□□ -0.63
GPC3-201ENST00000370818 A0A0B4J2A0 478 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 ZNF736B4DX44 427 aaPredicted RBP11.12□□□□□ -0.63
GPC3-201ENST00000370818 MRPL33O75394 65 aaKnown RBP11.12□□□□□ -0.63
GPC3-201ENST00000370818 FCGR3AP08637 254 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 SLC16A14Q7RTX9 510 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 TRAPPC6BQ86SZ2 158 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 ZNF584Q8IVC4 421 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 TUSC5Q8IXB3 177 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 SMIM8Q96KF7 97 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 MICU1Q9BPX6 476 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 SLC7A10Q9NS82 523 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 PPP1R14DQ9NXH3 145 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 SHPKQ9UHJ6 478 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 KLF13Q9Y2Y9 288 aaPredicted RBP11.12□□□□□ -0.63
GPC3-201ENST00000370818 LOC400499M0QZD8 3231 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 C7orf77A4D0Y5 90 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 CXorf65A6NEN9 183 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 SOCS1O15524 211 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 MMP7P09237 267 aaPredicted RBP11.12□□□□□ -0.63
GPC3-201ENST00000370818 CD80P33681 288 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 ALDH3B1P43353 468 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 TMEM50BP56557 158 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 PNLIPRP3Q17RR3 467 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 ZFP62Q8NB50 900 aaPredicted RBP11.12□□□□□ -0.63
GPC3-201ENST00000370818 C10orf35Q96D05 121 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 AKR1E2Q96JD6 320 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 LURAP1Q96LR2 239 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 TMEM59Q9BXS4 323 aa11.12□□□□□ -0.63
GPC3-201ENST00000370818 AMY2AP04746 511 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 CHRM2P08172 466 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 HIST1H1BP16401 226 aaKnown RBP11.11□□□□□ -0.63
GPC3-201ENST00000370818 PRSS12P56730 875 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 NKPD1Q17RQ9 610 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 UNQ6494/PRO21346Q6UXR6 183 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.11□□□□□ -0.63
GPC3-201ENST00000370818 CCDC54Q8NEL0 328 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 SAT2Q96F10 170 aaPredicted RBP11.11□□□□□ -0.63
GPC3-201ENST00000370818 REEP6Q96HR9 211 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 SLC6A7Q99884 636 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 SSX3Q99909 188 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 SULT4A1Q9BR01 284 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 LIPGQ9Y5X9 500 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 KLRC4-KLRK1H3BQV0 150 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 CRTAPO75718 401 aaPredicted RBP11.11□□□□□ -0.63
GPC3-201ENST00000370818 HLA-AP01891 365 aaKnown RBP11.11□□□□□ -0.63
GPC3-201ENST00000370818 LCATP04180 440 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 SNRNP70P08621 437 aaKnown RBP11.11□□□□□ -0.63
GPC3-201ENST00000370818 DAOP14920 347 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 CD82P27701 267 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 CDX1P47902 265 aaPredicted RBP11.11□□□□□ -0.63
GPC3-201ENST00000370818 PCBD1P61457 104 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 SRSF6Q13247 344 aaKnown RBP11.11□□□□□ -0.63
GPC3-201ENST00000370818 CLINT1Q14677 625 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 C3AR1Q16581 482 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 FAM24BQ8N5W8 94 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 OR13C8Q8NGS7 320 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 HAS2Q92819 552 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 RRNAD1Q96FB5 475 aaKnown RBP11.11□□□□□ -0.63
GPC3-201ENST00000370818 KIRREL1Q96J84 757 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 LINC00470Q9BZP3 86 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 CALHM2Q9HA72 323 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 BCO1Q9HAY6 547 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 GFOD1Q9NXC2 390 aa11.11□□□□□ -0.63
GPC3-201ENST00000370818 ZNF407Q9C0G0 2248 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 FBXO24O75426 580 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 FCGR2AP12318 317 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 FOXG1P55316 489 aaPredicted RBP11.1□□□□□ -0.63
GPC3-201ENST00000370818 NRN1LQ496H8 165 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 RNFT1Q5M7Z0 435 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms