RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 OR5AS1Q8N127 324 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 PARP16Q8N5Y8 322 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 KBTBD8Q8NFY9 601 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 OR52H1Q8NGJ2 320 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 OR13C3Q8NGS6 347 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 LINC01560Q8TB33 94 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 TMEM170AQ8WVE7 144 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 TSEN15Q8WW01 171 aaKnown RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 ITLN2Q8WWU7 325 aaPredicted RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 PHYHIPQ92561 330 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 RNASE6Q93091 150 aaKnown RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 ST6GALNAC6Q969X2 333 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 TMEM106AQ96A25 262 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 APOBEC3DQ96AK3 386 aaPredicted RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 MUCL1Q96DR8 90 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 ZC3HAV1LQ96H79 300 aaKnown RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 TMEM68Q96MH6 324 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 THAP7Q9BT49 309 aaPredicted RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 SLIRPQ9GZT3 109 aaKnown RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 CDH20Q9HBT6 801 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 TAS2R4Q9NYW5 299 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 TAS2R3Q9NYW6 316 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 PTTG3PQ9NZH4 202 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 PLEKHB1Q9UF11 243 aaPredicted RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 IL19Q9UHD0 177 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 ROS1P08922 2347 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 IGKV1-9A0A0C4DH69 117 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 LOC390937A0A1W2PQ73 354 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 FAM157AC9JC47 383 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 M0R1B8 84 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 ARL6IP5O75915 188 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 MAS1P04201 325 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 SLC2A2P11168 524 aaPredicted RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 DDOSTP39656 456 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 UCP2P55851 309 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 NAAAQ02083 359 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 HNRNPA0Q13151 305 aaKnown RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 UBE2V2Q15819 145 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 VWC2Q2TAL6 325 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 ALKBH6Q3KRA9 238 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 SLC51BQ86UW2 128 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 TPRA1Q86W33 373 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 COMMD2Q86X83 199 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 LYPD6Q86Y78 171 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 OR51A2Q8NGJ7 313 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 RNASE8Q8TDE3 154 aaKnown RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 CA5BP1Q8WTZ4 195 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 SLC25A46Q96AG3 418 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 NKX3-1Q99801 234 aaPredicted RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 UQCC2Q9BRT2 126 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 NXF2Q9GZY0 626 aaKnown RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 MMP27Q9H306 513 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 SP140LQ9H930 580 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 KCNJ16Q9NPI9 418 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 DKK2Q9UBU2 259 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 PIGLQ9Y2B2 252 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 AK6Q9Y3D8 172 aaKnown RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 HCFC1P51610 2035 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 FAM208BQ5VWN6 2430 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 ANKHD1Q8IWZ3 2542 aaKnown RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 SPTAN1Q13813 2472 aaKnown RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 PLCE1Q9P212 2302 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 ICE1Q9Y2F5 2266 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 HRNRQ86YZ3 2850 aaPredicted RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 A0A0B4J203 849 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 ATP6V1G2-DDX39BF2Z307 99 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 CASKO14936 926 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 XRCC2O43543 280 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 DHRS3O75911 302 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 PTBP3O95758 552 aaKnown RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 HOXB5P09067 269 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 RNF224P0DH78 156 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SRD5A1P18405 259 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 ATF1P18846 271 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 RAB3BP20337 219 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 MYL9P24844 172 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 MPV17P39210 176 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 RORCP51449 518 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 PPP1CBP62140 327 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SORDQ00796 357 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SRSF1Q07955 248 aaKnown RBP eCLIP3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR8B8Q15620 311 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 LBHQ53QV2 105 aaPredicted RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 TMEM42Q69YG0 159 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SIGIRRQ6IA17 410 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 FBXW12Q6X9E4 464 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 LINC00299Q6ZSB3 139 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SERPINA12Q8IW75 414 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SEMA6DQ8NFY4 1073 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR1M1Q8NGA1 313 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR52N4Q8NGI2 321 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR13C9Q8NGT0 318 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 SLC25A40Q8TBP6 338 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 BORCS5Q969J3 196 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 CMBLQ96DG6 245 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 OR2J1Q9GZK6 312 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 FGF23Q9GZV9 251 aaPredicted RBP3.01□□□□□ -1.93
MCF2-202ENST00000370573 RGCCQ9H4X1 137 aa3.01□□□□□ -1.93
MCF2-202ENST00000370573 GPR173Q9NS66 373 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 229.7 ms