RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CLCF1Q9UBD9 225 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 SFTA3P0C7M3 94 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 FFAR4Q5NUL3 377 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 ZBTB44Q8NCP5 570 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 MISP3Q96FF7 219 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 SPAARA0A1B0GVQ0 90 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 PNPP00491 289 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 Q56UQ5 140 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 DCAF10Q5QP82 559 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 ANKRD31Q8N7Z5 1873 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 OR5C1Q8NGR4 320 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 MARVELD1Q9BSK0 173 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 RNASEK-C17orf49H0YIS7 233 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 FBP1P09467 338 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 CTDSP1Q9GZU7 261 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 OR6C3Q9NZP0 311 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 CLLU1Q5K131 121 aa17.34■□□□□ 0.37
LMO4-202ENST00000370544 MPC2O95563 127 aa17.33■□□□□ 0.37
LMO4-202ENST00000370544 CD3EP07766 207 aa17.33■□□□□ 0.37
LMO4-202ENST00000370544 COMMD1Q8N668 190 aa17.33■□□□□ 0.37
LMO4-202ENST00000370544 NEIL1Q96FI4 390 aaPredicted RBP17.33■□□□□ 0.37
LMO4-202ENST00000370544 FAM103A1Q9BTL3 118 aaKnown RBP17.33■□□□□ 0.37
LMO4-202ENST00000370544 NTF3P20783 257 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 COX7A1P24310 79 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 H3F3AP84243 136 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 HLXQ14774 488 aaPredicted RBP17.33■□□□□ 0.36
LMO4-202ENST00000370544 CLEC12BQ2HXU8 276 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 ZNF501Q96CX3 271 aaPredicted RBP17.33■□□□□ 0.36
LMO4-202ENST00000370544 A0A1W2PPQ1 181 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 BCL3P20749 454 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 PRRX1P54821 245 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.33■□□□□ 0.36
LMO4-202ENST00000370544 DGAT2L6Q6ZPD8 337 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 RAB1BQ9H0U4 201 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 SLC52A3Q9NQ40 469 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 STARD10Q9Y365 291 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 DBX1A6NMT0 343 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 GREM1O60565 184 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 UQCC3Q6UW78 93 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 WDR13Q9H1Z4 485 aa17.33■□□□□ 0.36
LMO4-202ENST00000370544 IGKV1-8A0A0C4DH67 115 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 CENPVL1A0A0U1RR11 272 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 SPINK2P20155 84 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 MPGP29372 298 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 LSM11P83369 360 aaKnown RBP eCLIP17.32■□□□□ 0.36
LMO4-202ENST00000370544 FABP9Q0Z7S8 132 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 FKBP11Q9NYL4 201 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 RNF24Q9Y225 148 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 AMMECR1Q9Y4X0 333 aaPredicted RBP17.32■□□□□ 0.36
LMO4-202ENST00000370544 KIF13BQ9NQT8 1826 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 OR4C45A6NMZ5 311 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 IGKV1D-16P01601 117 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 ACAA2P42765 397 aaKnown RBP17.32■□□□□ 0.36
LMO4-202ENST00000370544 IL13RA2Q14627 380 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 ETFRF1Q6IPR1 90 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 TMEM38BQ9NVV0 291 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 FAM24AA6NFZ4 105 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 ZNF785A8K8V0 405 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 SOCS1O15524 211 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 AGFG2O95081 481 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 CTSDP07339 412 aaPredicted RBP17.32■□□□□ 0.36
LMO4-202ENST00000370544 COL19A1Q14993 1142 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 GUK1Q16774 197 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 V9GYH0 126 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 ZNF320A2RRD8 509 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 TRDCB7Z8K6 153 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 TMEM88Q6PEY1 159 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 OR6S1Q8NH40 331 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 RNF133Q8WVZ7 376 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 ANXA10Q9UJ72 324 aa17.32■□□□□ 0.36
LMO4-202ENST00000370544 C4orf17Q53FE4 359 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 PRSS54Q6PEW0 395 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 LRRC37AA6NMS7 1700 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 GEMIN2O14893 280 aaKnown RBP17.31■□□□□ 0.36
LMO4-202ENST00000370544 IRF3Q14653 427 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 IL36GQ9NZH8 169 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 SPINK9Q5DT21 86 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 ZNF429Q86V71 674 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 RPS4Y2Q8TD47 263 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 MMP26Q9NRE1 261 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 SEC14L6B5MCN3 397 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 MAP6Q96JE9 813 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 GPA33Q99795 319 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 GPR27Q9NS67 375 aa17.31■□□□□ 0.36
LMO4-202ENST00000370544 TRAV38-1A0A0B4J264 116 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 PJVKQ0ZLH3 352 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 ZNF528Q3MIS6 628 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 BTNL3Q6UXE8 466 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 DUSP18Q8NEJ0 188 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 GPR137Q96N19 417 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 GAR1Q9NY12 217 aaKnown RBP17.3■□□□□ 0.36
LMO4-202ENST00000370544 IGHV3-13P01766 116 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 IGHV3-7P01780 117 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 ERGP11308 486 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 HIKESHIQ53FT3 197 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 FAHD2BQ6P2I3 314 aaPredicted RBP17.3■□□□□ 0.36
LMO4-202ENST00000370544 OR2C3Q8N628 320 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 RND1Q92730 232 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 FAHD2AQ96GK7 314 aa17.3■□□□□ 0.36
LMO4-202ENST00000370544 B4E171 279 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms