RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SCMH1Q96GD3 660 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 ZNF576Q9H609 170 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 SLC45A2Q9UMX9 530 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 A0A087WUJ7 227 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 LOC107984156A0A0G2JMH3 177 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 MYOGP15173 224 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 NOVP48745 357 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 KISS1Q15726 138 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 BPIFA4PQ86YQ2 179 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 ARL17AQ8IVW1 177 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 RHNO1Q9BSD3 238 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 VN1R1Q9GZP7 353 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 BCL2L10Q9HD36 194 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 SLC17A5Q9NRA2 495 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 ARFGEF3Q5TH69 2177 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 C3orf85A0A1B0GTC6 90 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 IGHA1P01876 353 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 IGHA2P01877 340 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 KIR2DL1P43626 348 aaPredicted RBP11.14□□□□□ -0.63
HCFC1-202ENST00000369984 KIR2DL2P43627 348 aaPredicted RBP11.14□□□□□ -0.63
HCFC1-202ENST00000369984 CTF1Q16619 201 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 LYPD8Q6UX82 237 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 ZNF383Q8NA42 475 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 ASB16Q96NS5 453 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 SEC11CQ9BY50 192 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 DOCK3Q8IZD9 2030 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 MICBQ29980 383 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 GSG1Q2KHT4 349 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 MANBALQ9NQG1 85 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 DOK5Q9P104 306 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 FCGR3BO75015 233 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 HTRA3P83110 453 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 NCMAPQ5T1S8 102 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 SLC36A1Q7Z2H8 476 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 HSPB8Q9UJY1 196 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 CSN3P07498 182 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 OR5AC1P0C628 307 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 OR5M9Q8NGP3 310 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 PRRX2Q99811 253 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 SH2D2AQ9NP31 389 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 A0A1W2PN81 502 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 CLDN34H7C241 214 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 NDUFB6O95139 128 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 PTHLHP12272 177 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 ID4P47928 161 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 DYNLT3P51808 116 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 FAM53BQ14153 422 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 CCDC190Q86UF4 302 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 TMEM251Q8N6I4 163 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 RASL12Q9NYN1 266 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 MIOXQ9UGB7 285 aa11.14□□□□□ -0.63
HCFC1-202ENST00000369984 TNFSF15O95150 251 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 GNG3P63215 75 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 KIRREL2Q6UWL6 708 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 SFTPA2Q8IWL1 248 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 SFTPA1Q8IWL2 248 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 LYG1Q8N1E2 194 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 NPEPL1Q8NDH3 523 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 SRD5A3Q9H8P0 318 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 ACP1P24666 158 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 MDH2P40926 338 aaKnown RBP11.13□□□□□ -0.63
HCFC1-202ENST00000369984 CAPZBP47756 277 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 ZNF260Q3ZCT1 412 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 MUC20Q8N307 709 aaPredicted RBP11.13□□□□□ -0.63
HCFC1-202ENST00000369984 OR8A1Q8NGG7 326 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 MVB12AQ96EY5 273 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 ADAT3Q96EY9 351 aaPredicted RBP11.13□□□□□ -0.63
HCFC1-202ENST00000369984 KCNE3Q9Y6H6 103 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 DOCK6Q96HP0 2047 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 PPP1R1AQ13522 171 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 OR6S1Q8NH40 331 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 KTI12Q96EK9 354 aaPredicted RBP11.13□□□□□ -0.63
HCFC1-202ENST00000369984 PDFQ9HBH1 243 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 KIAA1551Q9HCM1 1747 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 MAP1LC3B2A6NCE7 125 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 WNT1P04628 370 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 STAG3L3P0CL85 134 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 PTGFRP43088 359 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 PKIAP61925 76 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 FNDC7Q5VTL7 733 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 KMT5CQ86Y97 462 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 ZGRF1Q86YA3 2104 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 DPH3Q96FX2 82 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 SNX22Q96L94 193 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 MAP1LC3BQ9GZQ8 125 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 A0A0A6YYD5 115 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 CD99P14209 185 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 SIGIRRQ6IA17 410 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 BTLAQ7Z6A9 289 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 CCL4L1Q8NHW4 92 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 ANAPC16Q96DE5 110 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 HSD17B10Q99714 261 aaKnown RBP11.13□□□□□ -0.63
HCFC1-202ENST00000369984 IL36GQ9NZH8 169 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 OR6C3Q9NZP0 311 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 RELBQ01201 579 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 FUT7Q11130 342 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 NUDT10Q8NFP7 164 aa11.13□□□□□ -0.63
HCFC1-202ENST00000369984 NUDT11Q96G61 164 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms