RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 ZNF429Q86V71 674 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 C9orf40Q8IXQ3 194 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 PAQR4Q8N4S7 273 aaPredicted RBP13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 APCDD1LQ8NCL9 501 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 ZNF596Q8TC21 504 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 TMEM239Q8WW34 195 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 SERINC4A6NH21 518 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 OR10J1P30954 320 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 P4HA3Q7Z4N8 544 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 WFDC8Q8IUA0 241 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 PGLYRP3Q96LB9 341 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 VSTM2LQ96N03 204 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 TXN2Q99757 166 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 RARRES2Q99969 163 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 ROS1P08922 2347 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 CDX4O14627 284 aaPredicted RBP13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 EPPINO95925 133 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 TDGF1P13385 188 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 UBE2V1Q13404 147 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 SLC22A6Q4U2R8 563 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 MBOAT2Q6ZWT7 520 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 CPEB2Q7Z5Q1 589 aaKnown RBP13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 TNFRSF13CQ96RJ3 184 aa13.55□□□□□ -0.24
SEMA6C-202ENST00000368912 ITGB2P05107 769 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 RAB35Q15286 201 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 OR51D1Q8NGF3 324 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 OR14L1PQ8NHC6 308 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 RNASEH2CQ8TDP1 164 aaKnown RBP13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 BCL2L2Q92843 193 aaPredicted RBP13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 TBX19O60806 448 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 MAKP20794 623 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 SUCLG1P53597 346 aaKnown RBP13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 MLC1Q15049 377 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 C1QL3Q5VWW1 255 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 LHFPL4Q7Z7J7 247 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 GBGT1Q8N5D6 347 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 BHLHE23Q8NDY6 225 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 NKD1Q969G9 470 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 MS4A10Q96PG2 267 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 MIEN1Q9BRT3 115 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 SLC22A31A6NKX4 558 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 UMODP07911 640 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 MMP16P51512 607 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 STPG1Q5TH74 334 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 ANKRD37Q7Z713 158 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 ZNF738Q8NE65 137 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 OR51F2Q8NH61 342 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 C19orf25Q9UFG5 118 aaPredicted RBP13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 TMEM131Q92545 1883 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 WDFY3Q8IZQ1 3526 aa13.54□□□□□ -0.24
SEMA6C-202ENST00000368912 DCDC2BA2VCK2 349 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 DMKNQ6E0U4 476 aaPredicted RBP13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 NECAP1Q8NC96 275 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 OR10G3Q8NGC4 313 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 SLC46A1Q96NT5 459 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 MGAQ8IWI9 3026 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 ATXN7O15265 892 aaPredicted RBP13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 COL10A1Q03692 680 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 CMBLQ96DG6 245 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 HCAR1Q9BXC0 346 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 SRA1Q9HD15 236 aaKnown RBP13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 PLA2G3Q9NZ20 509 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 PRR13Q9NZ81 148 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 DOCK7Q96N67 2140 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 ATRXP46100 2492 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 CEP192Q8TEP8 1941 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 A6NJY4 79 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 NPIPA2E9PIF3 369 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 H0YIZ8 118 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 K7EP13 123 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 PPBPP02775 128 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 SIRPAP78324 504 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 TMEM95Q3KNT9 176 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 MCEMP1Q8IX19 187 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 OR4X1Q8NH49 305 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 TVP23CQ96ET8 276 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 RNF126Q9BV68 326 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 CLDN16Q9Y5I7 305 aa13.53□□□□□ -0.24
SEMA6C-202ENST00000368912 GALR2O43603 387 aaPredicted RBP13.52□□□□□ -0.24
SEMA6C-202ENST00000368912 NKX2-2O95096 273 aa13.52□□□□□ -0.24
SEMA6C-202ENST00000368912 SCGB1D2O95969 90 aa13.52□□□□□ -0.24
SEMA6C-202ENST00000368912 CD59P13987 128 aa13.52□□□□□ -0.24
SEMA6C-202ENST00000368912 GZMHP20718 246 aa13.52□□□□□ -0.24
SEMA6C-202ENST00000368912 PRR27Q6MZM9 219 aa13.52□□□□□ -0.24
SEMA6C-202ENST00000368912 CATSPERDQ86XM0 798 aa13.52□□□□□ -0.24
SEMA6C-202ENST00000368912 ADAMTS18Q8TE60 1221 aa13.52□□□□□ -0.24
SEMA6C-202ENST00000368912 ZMYND19Q96E35 227 aaPredicted RBP13.52□□□□□ -0.24
SEMA6C-202ENST00000368912 CDC42EP2O14613 210 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 DDAH2O95865 285 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 CD33P20138 364 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 C6orf15Q6UXA7 325 aaPredicted RBP13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 HAS2Q92819 552 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 VAMP8Q9BV40 100 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 RTN4RQ9BZR6 473 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 SLCO5A1Q9H2Y9 848 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 KCNK15Q9H427 330 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 LAMP3Q9UQV4 416 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 ZFAND5O76080 213 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 GP1BBP13224 206 aa13.52□□□□□ -0.25
SEMA6C-202ENST00000368912 FPR2P25090 351 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms