RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RCC2Q9P258 522 aaKnown RBP9.27□□□□□ -0.92
TPM3-212ENST00000368533 DLL1O00548 723 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 SLC31A2O15432 143 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 SLC34A2O95436 690 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 PGAM2P15259 253 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 ZNF708P17019 499 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 FSTP19883 344 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 MSR1P21757 451 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 ACKR3P25106 362 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 ZNF93P35789 620 aaPredicted RBP9.27□□□□□ -0.93
TPM3-212ENST00000368533 HTR5AP47898 357 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 ENDOGQ14249 297 aaKnown RBP9.27□□□□□ -0.93
TPM3-212ENST00000368533 USF2Q15853 346 aaPredicted RBP9.27□□□□□ -0.93
TPM3-212ENST00000368533 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 MCEMP1Q8IX19 187 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 SLC22A24Q8N4F4 322 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 ZNF561Q8N587 486 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 NKAIN3Q8N8D7 197 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 ZFP62Q8NB50 900 aaPredicted RBP9.27□□□□□ -0.93
TPM3-212ENST00000368533 ADPRHL1Q8NDY3 354 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 OR5D18Q8NGL1 313 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 FOXRED1Q96CU9 486 aaPredicted RBP9.27□□□□□ -0.93
TPM3-212ENST00000368533 SEC11CQ9BY50 192 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 RHOFQ9HBH0 211 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 SMCO4Q9NRQ5 59 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 IFITM10A6NMD0 228 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 ZNF891A8MT65 544 aaPredicted RBP9.27□□□□□ -0.93
TPM3-212ENST00000368533 KALRNO60229 2985 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 VAMP5O95183 116 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 SSBP1Q04837 148 aaKnown RBP9.27□□□□□ -0.93
TPM3-212ENST00000368533 HIST3H3Q16695 136 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 C11orf87Q6NUJ2 197 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 CLEC9AQ6UXN8 241 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 RTN4RL2Q86UN3 420 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 TMEM68Q96MH6 324 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 PRRT1Q99946 306 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 TCEAL7Q9BRU2 100 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 PRSS50Q9UI38 385 aa9.27□□□□□ -0.93
TPM3-212ENST00000368533 ZNF878C9JN71 531 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 RAB27BO00194 218 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 IGHV2-5P01817 119 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 HLA-HP01893 362 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 AGAP20933 346 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 FKBP2P26885 142 aaKnown RBP9.26□□□□□ -0.93
TPM3-212ENST00000368533 HGFACQ04756 655 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 PPP1R1AQ13522 171 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 ARFRP1Q13795 201 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 MEF2DQ14814 521 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 C10orf91Q5T1B1 145 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 GLIPR1L1Q6UWM5 242 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 ZNF813Q6ZN06 617 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 DPPA2Q7Z7J5 298 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 OR8B12Q8NGG6 310 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 EXTL1Q92935 676 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 NABP1Q96AH0 204 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 TAAR6Q96RI8 345 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 TRIB1Q96RU8 372 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 NICN1Q9BSH3 213 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 CST11Q9H112 138 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 NELFAQ9H3P2 528 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 FOXD3Q9UJU5 478 aaPredicted RBP9.26□□□□□ -0.93
TPM3-212ENST00000368533 MCTS1Q9ULC4 181 aaKnown RBP9.26□□□□□ -0.93
TPM3-212ENST00000368533 VSIG4Q9Y279 399 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 HEXAP06865 529 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 VSIG8P0DPA2 414 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 COX5BP10606 129 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 ZNF32P17041 273 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 MMP16P51512 607 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 ZNF84P51523 738 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 GAMTQ14353 236 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 SURF2Q15527 256 aaPredicted RBP9.26□□□□□ -0.93
TPM3-212ENST00000368533 C20orf196Q8IYI0 205 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 BATF2Q8N1L9 274 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 OR5AP2Q8NGF4 316 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 OR13C8Q8NGS7 320 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 SECTM1Q8WVN6 248 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 TMPRSS5Q9H3S3 457 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 GPR84Q9NQS5 396 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 FAM206AQ9NX38 181 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 DNAJB11Q9UBS4 358 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 WASF3Q9UPY6 502 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 CADP27708 2225 aa9.26□□□□□ -0.93
TPM3-212ENST00000368533 BTBD17A6NE02 478 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 NPIPB13A6NJU9 1138 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 NPIPB4C9JG80 1138 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 M0R036 132 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 AP4M1O00189 453 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 CRTAPO75718 401 aaPredicted RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 SNAPC5O75971 98 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ISG15P05161 165 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ERCC1P07992 297 aaPredicted RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 SNRPCP09234 159 aaKnown RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 UNC119Q13432 240 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 RTP5Q14D33 572 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 C1orf100Q5SVJ3 147 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 DEGS2Q6QHC5 323 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 CNEP1R1Q8N9A8 125 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 TMEM54Q969K7 222 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 FOXB1Q99853 325 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ALX4Q9H161 411 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms