RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CITED2Q99967 270 aaPredicted RBP12.87□□□□□ -0.35
CKS1B-202ENST00000368436 TMEM133Q9H2Q1 129 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 IL36RNQ9UBH0 155 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 HILPDAQ9Y5L2 63 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 IGHV2-26A0A0B4J1V2 119 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 F2RL2O00254 374 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 PSPNO60542 156 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 INMTO95050 263 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 APOL3O95236 402 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 ERP29P30040 261 aaKnown RBP12.86□□□□□ -0.35
CKS1B-202ENST00000368436 NPBWR2P48146 333 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 RBP2P50120 134 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 ZNF91Q05481 1191 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 TMED1Q13445 227 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 ZNF146Q15072 292 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 GRK1Q15835 563 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 ZBTB49Q6ZSB9 765 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 ZNF676Q8N7Q3 588 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 TPRX1Q8N7U7 411 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 OR10H4Q8NGA5 316 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 PP6455Q8WZ26 134 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 R3HDM4Q96D70 268 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 CIB1Q99828 191 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 OCSTAMPQ9BR26 566 aa12.86□□□□□ -0.35
CKS1B-202ENST00000368436 NOTCH3Q9UM47 2321 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 IGKV1-9A0A0C4DH69 117 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 LOC107986453A0A1B0GWG9 222 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 MGST3O14880 152 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 UBCP0CG48 685 aaKnown RBP12.85□□□□□ -0.35
CKS1B-202ENST00000368436 BCL3P20749 454 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 AZGP1P25311 298 aaKnown RBP12.85□□□□□ -0.35
CKS1B-202ENST00000368436 FASP25445 335 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 POLR2IP36954 125 aaKnown RBP12.85□□□□□ -0.35
CKS1B-202ENST00000368436 KIR3DL2P43630 455 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 ATP1B3P54709 279 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 ZNF85Q03923 595 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 SLC34A1Q06495 639 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 FAM58AQ8N1B3 248 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 EME1Q96AY2 570 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 OR5M11Q96RB7 305 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 CLEC7AQ9BXN2 247 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 GABARAPL3Q9BY60 117 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 CHST6Q9GZX3 395 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 RBFOX1Q9NWB1 397 aaKnown RBP12.85□□□□□ -0.35
CKS1B-202ENST00000368436 ZNF281Q9Y2X9 895 aa12.85□□□□□ -0.35
CKS1B-202ENST00000368436 UBE2J1Q9Y385 318 aaPredicted RBP12.85□□□□□ -0.35
CKS1B-202ENST00000368436 TRBV2A0A0J9YWF9 115 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 PIN1P1O15428 100 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 ENTPD6O75354 484 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 PEX14O75381 377 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 MMP23AO75900 390 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 ALDOBP05062 364 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 GABRR1P24046 479 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 HTR1DP28221 377 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 DUSP1P28562 367 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 VDAC2P45880 294 aaPredicted RBP12.84□□□□□ -0.35
CKS1B-202ENST00000368436 OR3A1P47881 315 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 CD83Q01151 205 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 SPIN3Q5JUX0 258 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 UTS2BQ765I0 119 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 AMIGO2Q86SJ2 522 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 RDH10Q8IZV5 341 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 WFDC9Q8NEX5 89 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 OR4P4Q8NGL7 312 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 OR8J1Q8NGP2 316 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 NDNFQ8TB73 568 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 BCAS4Q8TDM0 211 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 ADAT3Q96EY9 351 aaPredicted RBP12.84□□□□□ -0.35
CKS1B-202ENST00000368436 AP4S1Q9Y587 144 aa12.84□□□□□ -0.35
CKS1B-202ENST00000368436 DNAH3Q8TD57 4116 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 H3BUI4 141 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 CYB5AP00167 134 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 ISG15P05161 165 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 ATF1P18846 271 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 ATP6V1E1P36543 226 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 MTCP1P56278 107 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 P2RX3P56373 397 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 LOXL3P58215 753 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 CDC42P60953 191 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 IL18R1Q13478 541 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 TMEM95Q3KNT9 176 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 TP53I3Q53FA7 332 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 TMEM244Q5VVB8 128 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 C16orf82Q7Z2V1 217 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 FAM220AQ7Z4H9 259 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 OR5AU1Q8NGC0 362 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 MRAPQ8TCY5 172 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 RFKQ969G6 155 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 PHF21AQ96BD5 680 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 HMG20AQ9NP66 347 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 AURKAIP1Q9NWT8 199 aaPredicted RBP12.83□□□□□ -0.36
CKS1B-202ENST00000368436 GLS2Q9UI32 602 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 GNG8Q9UK08 70 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 KIAA2026Q5HYC2 2103 aa12.83□□□□□ -0.36
CKS1B-202ENST00000368436 CALCBP10092 127 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 PRKACAP17612 351 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 PRKACBP22694 351 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 LMO1P25800 156 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 POU3F4P49335 361 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms