RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 TFR2Q9UP52 801 aa0.99□□□□□ -2.25
RNU6-553P-201ENST00000364047 SLC7A11Q9UPY5 501 aa0.99□□□□□ -2.25
RNU6-553P-201ENST00000364047 KNCNA6PVL3 124 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 C17orf98A8MV24 154 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 F5H5T6 163 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 ZNF701M0R085 212 aaPredicted RBP0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 PDYNP01213 254 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 OR8G3PP0DMU2 310 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 PSMB9P28065 219 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 GABRR2P28476 465 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 BLVRBP30043 206 aaPredicted RBP0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 SPIN4Q56A73 249 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 CMTM8Q8IZV2 173 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 DEFB119Q8N690 84 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 NT5CQ8TCD5 201 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 OR8D1Q8WZ84 308 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 B9D2Q9BPU9 175 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 CLSTN2Q9H4D0 955 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 CYB5R1Q9UHQ9 305 aa0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 BRCA1P38398 1863 aaKnown RBP0.98□□□□□ -2.25
RNU6-553P-201ENST00000364047 MYO9BQ13459 2157 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 TRBV24-1A0A075B6N3 115 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 FAM240AA0A1B0GVK7 77 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 ERICH4A6NGS2 130 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 KLRC4-KLRK1H3BQV0 150 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 WRBO00258 174 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 POP7O75817 140 aaKnown RBP0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 RAB36O95755 333 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 CD9P21926 228 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 BEX3Q00994 111 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 ACSBG2Q5FVE4 666 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 TMEM215Q68D42 235 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 SLC25A25Q6KCM7 469 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 EPGNQ6UW88 154 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 C22orf15Q8WYQ4 148 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 ZNF625Q96I27 306 aaPredicted RBP0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 QKIQ96PU8 341 aaKnown RBP eCLIP0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 OR2M4Q96R27 311 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 C20orf144Q9BQM9 153 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 AICDAQ9GZX7 198 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 OR2D2Q9H210 308 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 PRRC2BQ5JSZ5 2229 aaKnown RBP0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 C2orf16Q68DN1 1984 aa0.97□□□□□ -2.25
RNU6-553P-201ENST00000364047 PLXNB3Q9ULL4 1909 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 TRAV25A0A0B4J276 109 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 GOLGA8TH3BQL2 631 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 H3BRN7 92 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 GYG2O15488 501 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 GPR75O95800 540 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 KLK1P06870 262 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 MAGEA1P43355 309 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 MLF1P58340 268 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 IL18Q14116 193 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 TOMM34Q15785 309 aaPredicted RBP0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 NAT6Q93015 286 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 MAL2Q969L2 176 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 CXCL16Q9H2A7 254 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 MFSD1Q9H3U5 465 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 ARMC7Q9H6L4 198 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 EXO5Q9H790 373 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 OR51B4Q9Y5P0 310 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 SBNO1A3KN83 1393 aa0.96□□□□□ -2.26
RNU6-553P-201ENST00000364047 FLG2Q5D862 2391 aaPredicted RBP0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 TCAPO15273 167 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 SH2D1AO60880 128 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 ANGP03950 147 aaKnown RBP0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 OR5AL1P0C617 328 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 SCGB1C2P0DMR2 95 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 TAC1P20366 129 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 PMCHP20382 165 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 HES1Q14469 280 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 CASP8Q14790 479 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 IDNKQ5T6J7 187 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 N4BP2L1Q5TBK1 243 aaPredicted RBP0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 NIPAL1Q6NVV3 410 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 SCXQ7RTU7 201 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 SETD3Q86TU7 594 aaPredicted RBP0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 KATNAL2Q8IYT4 538 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 C2orf73Q8N5S3 287 aaPredicted RBP0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 SCGB1C1Q8TD33 95 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 DNAJC30Q96LL9 226 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 RILPQ96NA2 401 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 TSNAXQ99598 290 aaKnown RBP0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 COA1Q9GZY4 146 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 SDHAF3Q9NRP4 125 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 VPREB3Q9UKI3 123 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 CFL2Q9Y281 166 aa0.95□□□□□ -2.26
RNU6-553P-201ENST00000364047 SLC5A10A0PJK1 596 aa0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 OR2AT4A6NND4 320 aa0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 CD300LBA8K4G0 201 aa0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 ZNF99A8MXY4 864 aaPredicted RBP0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 PLEKHA8P1O95397 391 aa0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 RLN2P04090 185 aa0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 SOD3P08294 240 aa0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 OR12D1P0DN82 309 aa0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 GABRA1P14867 456 aa0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 MSR1P21757 451 aa0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 CNTFRP26992 372 aa0.94□□□□□ -2.26
RNU6-553P-201ENST00000364047 GPR176Q14439 515 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms