RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 RASL12Q9NYN1 266 aa17.37■□□□□ 0.37
SHISA4-201ENST00000362011 RABL2AQ9UBK7 228 aaPredicted RBP17.37■□□□□ 0.37
SHISA4-201ENST00000362011 RABL2BQ9UNT1 228 aa17.37■□□□□ 0.37
SHISA4-201ENST00000362011 IGHV1-69-2A0A0G2JMI3 117 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 LRRC30A6NM36 301 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 WNT9BO14905 357 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 XRCC3O43542 346 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 HPXP02790 462 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 INHBBP09529 407 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 EGR1P18146 543 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 GABRR1P24046 479 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 NR4A2P43354 598 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 MADCAM1Q13477 382 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 IL18Q14116 193 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 IL13RA2Q14627 380 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 ZNF846Q147U1 533 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 SMIM21Q3B7S5 101 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 ACP7Q6ZNF0 438 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 LINC00596Q86U02 117 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 IZUMO1Q8IYV9 350 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 C1orf87Q8N0U7 546 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 MFSD4AQ8N468 514 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 LIME1Q9H400 295 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 TREM2Q9NZC2 230 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 V9GYH0 126 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 ABCA2Q9BZC7 2435 aa17.36■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A10PA6NDY2 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A18PA6NE21 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A16PA6NEW6 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A20PA6NIJ5 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A8PA6NJQ4 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A7PA6NKC0 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A22PA8MWA6 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A12PA8MX19 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A5PA8MXJ8 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A23PA8MXZ1 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 RAB27BO00194 218 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 SOCS1O15524 211 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 CYB5R3P00387 301 aaPredicted RBP17.35■□□□□ 0.37
SHISA4-201ENST00000362011 LHBP01229 141 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A15PP0C7V4 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A13PP0C7W8 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A14PP0C7W9 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A24PP0C7X0 464 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 PTBP1P26599 531 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHISA4-201ENST00000362011 CDKN1AP38936 164 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 TAS2R20P59543 309 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 TAF9Q16594 264 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 MPV17LQ2QL34 196 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 MOGAT2Q3SYC2 334 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 BOLLQ8N9W6 283 aaKnown RBP17.35■□□□□ 0.37
SHISA4-201ENST00000362011 OR10R2Q8NGX6 335 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 SOSTQ9BQB4 213 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 NUDT16L1Q9BRJ7 211 aaKnown RBP17.35■□□□□ 0.37
SHISA4-201ENST00000362011 WDR13Q9H1Z4 485 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 IL36RNQ9UBH0 155 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 NPTNQ9Y639 398 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 ACANP16112 2415 aa17.35■□□□□ 0.37
SHISA4-201ENST00000362011 C3orf80F5H4A9 247 aa17.34■□□□□ 0.37
SHISA4-201ENST00000362011 GEMIN2O14893 280 aaKnown RBP17.34■□□□□ 0.37
SHISA4-201ENST00000362011 FOSL1P15407 271 aa17.34■□□□□ 0.37
SHISA4-201ENST00000362011 BLVRBP30043 206 aaPredicted RBP17.34■□□□□ 0.37
SHISA4-201ENST00000362011 MNDAP41218 407 aa17.34■□□□□ 0.37
SHISA4-201ENST00000362011 PYHIN1Q6K0P9 492 aa17.34■□□□□ 0.37
SHISA4-201ENST00000362011 FAM90A1Q86YD7 464 aa17.34■□□□□ 0.37
SHISA4-201ENST00000362011 CHST4Q8NCG5 386 aa17.34■□□□□ 0.37
SHISA4-201ENST00000362011 CCL19Q99731 98 aa17.34■□□□□ 0.37
SHISA4-201ENST00000362011 TMEM106BQ9NUM4 274 aa17.34■□□□□ 0.37
SHISA4-201ENST00000362011 CACNG2Q9Y698 323 aa17.34■□□□□ 0.37
SHISA4-201ENST00000362011 TRAV18A0A075B6X5 111 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 OVOL3O00110 214 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 TPPPO94811 219 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 KNG1P01042 644 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 CD80P33681 288 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 PITPNAQ00169 270 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 IKZF1Q13422 519 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 HFEQ30201 348 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 SPIN3Q5JUX0 258 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 IGFBPL1Q8WX77 278 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 MBD6Q96DN6 1003 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 RAB3CQ96E17 227 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 DNAJB11Q9UBS4 358 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 GLS2Q9UI32 602 aa17.33■□□□□ 0.36
SHISA4-201ENST00000362011 MRPS7Q9Y2R9 242 aaKnown RBP17.33■□□□□ 0.36
SHISA4-201ENST00000362011 MAP1AP78559 2803 aaPredicted RBP17.33■□□□□ 0.36
SHISA4-201ENST00000362011 A0A0G2JMP0 313 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 A0A0X1KG70 313 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 FOXI3A8MTJ6 420 aaPredicted RBP17.32■□□□□ 0.36
SHISA4-201ENST00000362011 TMEM178BH3BS89 294 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 H3BUI4 141 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.32■□□□□ 0.36
SHISA4-201ENST00000362011 OR7C1O76099 320 aaPredicted RBP17.32■□□□□ 0.36
SHISA4-201ENST00000362011 RBMXP38159 391 aaKnown RBP17.32■□□□□ 0.36
SHISA4-201ENST00000362011 PTH2RP49190 550 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 HOXA4Q00056 320 aaPredicted RBP17.32■□□□□ 0.36
SHISA4-201ENST00000362011 ZNF146Q15072 292 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 ZNF79Q15937 498 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 OR4M2Q8NGB6 313 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 C15orf40Q8WUR7 153 aa17.32■□□□□ 0.36
SHISA4-201ENST00000362011 CCL17Q92583 94 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms