RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 MOB4Q9Y3A3 225 aa10.98□□□□□ -0.65
VPS29-201ENST00000360579 HSPE1-MOB4S4R3N1 261 aa10.98□□□□□ -0.65
VPS29-201ENST00000360579 V9GYS6 101 aa10.98□□□□□ -0.65
VPS29-201ENST00000360579 TMEM82A0PJX8 343 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 ARRDC5A6NEK1 342 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 SH2D7A6NKC9 451 aaPredicted RBP10.97□□□□□ -0.65
VPS29-201ENST00000360579 OOSP1A8MZH6 123 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 TTRP02766 147 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 FAM106CPP0CH98 169 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 SNRPBP14678 240 aaKnown RBP10.97□□□□□ -0.65
VPS29-201ENST00000360579 GABRR1P24046 479 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 ERP29P30040 261 aaKnown RBP10.97□□□□□ -0.65
VPS29-201ENST00000360579 OR3A4PP47883 348 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 SLC35B1P78383 322 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 ZNF329Q86UD4 541 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 CPOQ8IVL8 374 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 Q8IYB0 196 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 TPRX1Q8N7U7 411 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 KLHL30-AS1Q8NEE0 82 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 Q8NFD4 153 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 LYSTQ99698 3801 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 TEX12Q9BXU0 123 aa10.97□□□□□ -0.65
VPS29-201ENST00000360579 FAM230AA0A1W2PPH8 454 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 LOC110117498-PIK3R3F6TDL0 507 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 TOR1AO14656 332 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 MGST3O14880 152 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 HAND1O96004 215 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 IGLV1-47P01700 117 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 HCCSP53701 268 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 P2RX3P56373 397 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 ACTR3P61158 418 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 GINS1Q14691 196 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 BCL2L15Q5TBC7 163 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 CYP2R1Q6VVX0 501 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 HEPN1Q6WQI6 88 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 EGFL6Q8IUX8 553 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 ZNF695Q8IW36 515 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 FEVQ99581 238 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 PCDHB16Q9NRJ7 776 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 NDE1Q9NXR1 346 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 MTCH1Q9NZJ7 389 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 ACTR3BQ9P1U1 418 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 IKZF2Q9UKS7 526 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 GTF2A1LQ9UNN4 478 aa10.96□□□□□ -0.65
VPS29-201ENST00000360579 TENM2Q9NT68 2774 aa10.96□□□□□ -0.66
VPS29-201ENST00000360579 TRGV10A0A0A0MS01 117 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 FUOMA2VDF0 154 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 F8VVB4 439 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 F8VWA3 439 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 MMP23AO75900 390 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 SLC2A5P22732 501 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 CDK2P24941 298 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 CHATP28329 748 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 CD34P28906 385 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 PRRX1P54821 245 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 MFGE8Q08431 387 aaPredicted RBP10.95□□□□□ -0.66
VPS29-201ENST00000360579 HLA-DRB5Q30154 266 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 C4orf48Q5BLP8 95 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 TPTE2P1Q5T6R2 138 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 C9orf66Q5T8R8 295 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 PRAMEF5Q5TYX0 476 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 C16orf89Q6UX73 402 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 THNSL2Q86YJ6 484 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 ELMOD2Q8IZ81 293 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 BBS1Q8NFJ9 593 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 OR52N4Q8NGI2 321 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 OR14K1Q8NGZ2 314 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 TRMT10AQ8TBZ6 339 aaKnown RBP10.95□□□□□ -0.66
VPS29-201ENST00000360579 GIPC3Q8TF64 312 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 EMG1Q92979 244 aaKnown RBP10.95□□□□□ -0.66
VPS29-201ENST00000360579 SLAMF9Q96A28 289 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 CADM1Q9BY67 442 aaKnown RBP10.95□□□□□ -0.66
VPS29-201ENST00000360579 CHST6Q9GZX3 395 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 PLEKHA1Q9HB21 404 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 TAS2R3Q9NYW6 316 aa10.95□□□□□ -0.66
VPS29-201ENST00000360579 SERPINE3A8MV23 424 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 CCL24O00175 119 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 PSPNO60542 156 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 GATBO75879 557 aaKnown RBP10.94□□□□□ -0.66
VPS29-201ENST00000360579 SASH3O75995 380 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 IGHA1P01876 353 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 FUT6P51993 359 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 RAB25P57735 213 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 CDC42P60953 191 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 ZNF91Q05481 1191 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 APOFQ13790 326 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 FAM98BQ52LJ0 330 aaKnown RBP10.94□□□□□ -0.66
VPS29-201ENST00000360579 Q6ZSR3 168 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 C18orf65Q6ZTR6 163 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 OR5M8Q8NGP6 311 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 PRR25Q96S07 402 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 ASCL2Q99929 193 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 OR52A1Q9UKL2 312 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 SNX5Q9Y5X3 404 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 R4GMQ9 66 aa10.94□□□□□ -0.66
VPS29-201ENST00000360579 DSCAML1Q8TD84 2053 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 A0A1B0GTI1 187 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 A6NIN4 97 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 FGF16O43320 207 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms