RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 SLC25A26Q70HW3 274 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 TMEM200AQ86VY9 491 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 LRTM2Q8N967 370 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 OR56B2PQ8NGI1 322 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 RTN4IP1Q8WWV3 396 aaPredicted RBP22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 MRPL24Q96A35 216 aaKnown RBP22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 SUCNR1Q9BXA5 334 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 CALHM2Q9HA72 323 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 STARD10Q9Y365 291 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 PQLC2LA1A4F0 135 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 FAM157CP0CG43 387 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 FCGR2CP31995 323 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 TMEM187Q14656 261 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 MOB3AQ96BX8 217 aa22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 PAPOLGQ9BWT3 736 aaKnown RBP22.74■■□□□ 1.23
CUEDC1-201ENST00000360238 GLP1RP43220 463 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 DAZAP2Q15038 168 aaPredicted RBP22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 EIF5AL1Q6IS14 154 aaKnown RBP22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 FAM219AQ8IW50 185 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 SAXO1Q8IYX7 474 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 TMEM251Q8N6I4 163 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 LRRC46Q96FV0 321 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 NARS2Q96I59 477 aaKnown RBP22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 AHCTF1Q8WYP5 2266 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 A0A096LPE4 126 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 A0A1W2PPZ6 126 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 FAM221AA4D161 298 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 PLA2G2CQ5R387 149 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 APOBEC3DQ96AK3 386 aaPredicted RBP22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 ZNF442Q9H7R0 627 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 SLC2A9Q9NRM0 540 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 LPAR3Q9UBY5 353 aa22.73■■□□□ 1.23
CUEDC1-201ENST00000360238 HLA-HP01893 362 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 FXYD4P59646 89 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 C9orf135Q5VTT2 229 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 ATRAIDQ6UW56 229 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 FOXRED2Q8IWF2 684 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 APH1AQ96BI3 265 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 K7EPK0 472 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 SS18L1O75177 396 aaPredicted RBP22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 OR7C1O76099 320 aaPredicted RBP22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 OR5AC1P0C628 307 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 RPL12P30050 165 aaKnown RBP22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 PRDX4Q13162 271 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 FAM71E2Q8N5Q1 922 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 IP6K3Q96PC2 410 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 PRRX2Q99811 253 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 PRRG4Q9BZD6 226 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 OR2S2Q9NQN1 319 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 MMP26Q9NRE1 261 aa22.72■■□□□ 1.23
CUEDC1-201ENST00000360238 C5orf49A4QMS7 147 aa22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 TPD52L2O43399 206 aaKnown RBP22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 MT-CO3P00414 261 aa22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 NPBWR2P48146 333 aa22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 PLGLB1Q02325 96 aa22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 RNPS1Q15287 305 aaKnown RBP22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 Q6ZPA2 131 aa22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 LINC00696Q6ZRV3 163 aa22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 MRPL21Q7Z2W9 205 aaKnown RBP22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 SAT2Q96F10 170 aaPredicted RBP22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 SYT3Q9BQG1 590 aa22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 ZC4H2Q9NQZ6 224 aa22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 PLA2G3Q9NZ20 509 aa22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 ARHGAP21Q5T5U3 1957 aa22.71■■□□□ 1.23
CUEDC1-201ENST00000360238 PRSS44E7EML9 344 aa22.7■■□□□ 1.23
CUEDC1-201ENST00000360238 CST4P01036 141 aa22.7■■□□□ 1.23
CUEDC1-201ENST00000360238 CCNOP22674 350 aa22.7■■□□□ 1.23
CUEDC1-201ENST00000360238 ARR3P36575 388 aa22.7■■□□□ 1.23
CUEDC1-201ENST00000360238 DEFA5Q01523 94 aa22.7■■□□□ 1.23
CUEDC1-201ENST00000360238 SPEM2Q0P670 501 aa22.7■■□□□ 1.23
CUEDC1-201ENST00000360238 IL34Q6ZMJ4 242 aa22.7■■□□□ 1.23
CUEDC1-201ENST00000360238 Q6ZS49 121 aa22.7■■□□□ 1.23
CUEDC1-201ENST00000360238 BOLLQ8N9W6 283 aaKnown RBP22.7■■□□□ 1.23
CUEDC1-201ENST00000360238 TMEM218A2RU14 115 aa22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 M0R296 226 aa22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 GAPDHP04406 335 aaKnown RBP22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 RPL7L1Q6DKI1 246 aaKnown RBP22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 LIAT1Q6ZQX7 453 aa22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 ZDHHC23Q8IYP9 409 aa22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 CCDC71LQ8N9Z2 235 aa22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 HPSE2Q8WWQ2 592 aa22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 RSRP1Q9BUV0 290 aa22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 OPA3Q9H6K4 179 aa22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 TAF9BQ9HBM6 251 aa22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 KLF13Q9Y2Y9 288 aaPredicted RBP22.7■■□□□ 1.22
CUEDC1-201ENST00000360238 ZNF205O95201 554 aa22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 ACTL6AO96019 429 aa22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 ATF4P18848 351 aaPredicted RBP22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 HERV-K104P61576 105 aa22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 CEACAM21Q3KPI0 293 aa22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 PLEKHA2Q9HB19 425 aa22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 MUC3AQ02505 3323 aa22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 ZNF705EA8MWA4 302 aaPredicted RBP22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 FOXG1P55316 489 aaPredicted RBP22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 PDCD1Q15116 288 aa22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 SRSF7Q16629 238 aaKnown RBP eCLIP22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 SMUG1Q53HV7 270 aa22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 SMIM8Q96KF7 97 aa22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 C18orf12Q96KH6 178 aa22.69■■□□□ 1.22
CUEDC1-201ENST00000360238 FREM2Q5SZK8 3169 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms