RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SERPINE3A8MV23 424 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 PRSS44E7EML9 344 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 F5H5P2 479 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 H3BUI4 141 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 GRPP07492 148 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 RCVRNP35243 200 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 FAUP35544 74 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 CD200P41217 278 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 NPBWR2P48146 333 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 RFX2P48378 723 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 ARFRP1Q13795 201 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 TAF9Q16594 264 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 NKPD1Q17RQ9 610 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 PCGF3Q3KNV8 242 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 PIGYQ3MUY2 71 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 NHLRC3Q5JS37 347 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 PLAC9Q5JTB6 97 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 GDPD3Q7L5L3 318 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 NRARPQ7Z6K4 114 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 TRAPPC6BQ86SZ2 158 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 LINC00596Q86U02 117 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 OR2Z1Q8NG97 314 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 SEH1LQ96EE3 360 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 NEDD4LQ96PU5 975 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 PECRQ9BY49 303 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 RBFOX1Q9NWB1 397 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 HSF4Q9ULV5 492 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 RNF115Q9Y4L5 304 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 A0A1B0GVG6 124 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM240BA0A1B0GVZ2 78 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 MEIS3P1A6NDR6 274 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 NAP1L6A6NFF2 107 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 ZSCAN5BA6NJL1 495 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 SSX4O60224 188 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 CA11O75493 328 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 PRKACAP17612 351 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 KIR2DL3P43628 341 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 CBX5P45973 191 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 TMEM50BP56557 158 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 TAS2R19P59542 299 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 SNTB1Q13884 538 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 IL13RA2Q14627 380 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 ADIPOQQ15848 244 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 MPV17LQ2QL34 196 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 NKAPLQ5M9Q1 402 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 OLFML2AQ68BL7 652 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 CCBE1Q6UXH8 406 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM58AQ8N1B3 248 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 NUDCD2Q8WVJ2 157 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 ST8SIA4Q92187 359 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 EMG1Q92979 244 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 ELMOD3Q96FG2 381 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 TLNRD1Q9H1K6 362 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 IFT46Q9NQC8 304 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 PLEKHJ1Q9NW61 149 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 ZNF107Q9UII5 783 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 KLF2Q9Y5W3 355 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 DCHS2Q6V1P9 2916 aa11.74□□□□□ -0.53
PDLIM5-203ENST00000359265 TACC2O95359 2948 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 GEMIN2O14893 280 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 TPD52L2O43399 206 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 PDCD6O75340 191 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 RHBDL1O75783 438 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 ACAA1P09110 424 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 OR4A8P0C604 315 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 PGA5P0DJD9 388 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 SPNP16150 400 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 TNFSF4P23510 183 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 CHATP28329 748 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 ZNF81P51508 661 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 PRAMEF6Q5VXH4 476 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 SIGIRRQ6IA17 410 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 FIP1L1Q6UN15 594 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 DMRTC2Q8IXT2 367 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 BATF2Q8N1L9 274 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 CELF2-AS1Q8N7Q2 184 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 TMEM229BQ8NBD8 167 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 POC1AQ8NBT0 407 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM222BQ8WU58 562 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 GTF3AQ92664 365 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 DPAGT1Q9H3H5 408 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 ELF5Q9UKW6 265 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 ZDHHC8Q9ULC8 765 aa11.73□□□□□ -0.53
PDLIM5-203ENST00000359265 TANC2Q9HCD6 1990 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 hCG_2014768A0A024R1R8 64 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 CDIPTO14735 213 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 OR7C1O76099 320 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 PTBP3O95758 552 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 AKAIN1P0CW23 69 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 FUT3P21217 361 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 SNU13P55769 128 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 MAB21L1Q13394 359 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 IKZF1Q13422 519 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 C6orf201Q7Z4U5 140 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 RTN4RL2Q86UN3 420 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 ZNF488Q96MN9 340 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 DIRC2Q96SL1 478 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 NRIP2Q9BQI9 281 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms