RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CCL2P13500 99 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 AADACP22760 399 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 ACKR3P25106 362 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 THBS4P35443 961 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 IDH3GP51553 393 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-203ENST00000358528 SNAI3Q3KNW1 292 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 OR2T2Q6IF00 324 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 SSX9Q7RTT3 188 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 AAED1Q7RTV5 226 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 C5orf24Q7Z6I8 188 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 DPPA2Q7Z7J5 298 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 MAML2Q8IZL2 1156 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-203ENST00000358528 OR2C3Q8N628 320 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 SLC35G3Q8N808 338 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 SLC25A43Q8WUT9 341 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-203ENST00000358528 RDH5Q92781 318 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 RHOVQ96L33 236 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 SPIN2AQ99865 258 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 SPIN2BQ9BPZ2 258 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 SLC25A31Q9H0C2 315 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 CRLF2Q9HC73 371 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 FSCN3Q9NQT6 498 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 MYOTQ9UBF9 498 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 GAB2Q9UQC2 676 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 WSB1Q9Y6I7 421 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 R4GN57 208 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 DNAJC13O75165 2243 aa5.75□□□□□ -1.49
CSDE1-203ENST00000358528 IGHV1OR15-9A0A0B4J2B8 117 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 CEBPZOSA8MTT3 80 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ANOS1P23352 680 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ATP6V0CP27449 155 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 OTX2P32243 289 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 SNCAP37840 140 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ADIRFQ15847 76 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 RTL6Q6ICC9 239 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 OSR2Q8N2R0 312 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF383Q8NA42 475 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 PP6455Q8WZ26 134 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 PLK3Q9H4B4 646 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 TRIOO75962 3097 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 A0A087WZY1 265 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 RBFOX3A6NFN3 312 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 H3BQ15 152 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 TRAF3IP2O43734 574 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 EFNA2O43921 213 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 PIAS2O75928 621 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 GALNSP34059 522 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 EWSR1Q01844 656 aaKnown RBP eCLIP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 TMEM267Q0VDI3 215 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF154Q13106 437 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 PLPPR5Q32ZL2 321 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 BTNL8Q6UX41 500 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 SLC39A7Q92504 469 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 NAT6Q93015 286 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 TMPRSS5Q9H3S3 457 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 TMEM100Q9NV29 134 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 CLEC1BQ9P126 229 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 NCOA6Q14686 2063 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 IGKV3D-11A0A0A0MRZ8 115 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 A0A0U1RQK1 487 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 C9J4A7 227 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 PHOX2AO14813 284 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 BCAT2O15382 392 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 DLK1P80370 383 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 QRFPP83859 136 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 IZUMO4Q1ZYL8 232 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 OR8G2PQ6IF36 304 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 LIAT1Q6ZQX7 453 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 VASH2Q86V25 355 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 CYB561D1Q8N8Q1 229 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 UBAC2Q8NBM4 344 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 OR6X1Q8NH79 312 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 SPACA9Q96E40 222 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF837Q96EG3 531 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 AKIRIN1Q9H9L7 192 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 STRAPQ9Y3F4 350 aaKnown RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ZDBF2Q9HCK1 2354 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 TRAV39A0A0B4J263 110 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 DBX1A6NMT0 343 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 E9PLN8 166 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 CXCL13O43927 109 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 TIAF1O95411 115 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 FCGR3AP08637 254 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF32P17041 273 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 TCN2P20062 427 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 MSX1P28360 303 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ECI1P42126 302 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 DYNLT3P51808 116 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 FAM3AP98173 230 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ZP4Q12836 540 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 MPV17LQ2QL34 196 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 OR2B11Q5JQS5 317 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 CXorf66Q5JRM2 361 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF610Q8N9Z0 462 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 HPSE2Q8WWQ2 592 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 INTS12Q96CB8 462 aaKnown RBP5.74□□□□□ -1.49
CSDE1-203ENST00000358528 RAB39BQ96DA2 213 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 SHDQ96IW2 340 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms