RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 VSIG8P0DPA2 414 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 RPS2P15880 293 aaKnown RBP12.74□□□□□ -0.37
TPM1-206ENST00000358278 MGMTP16455 207 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 PIGYQ3MUY2 71 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 TMEM104Q8NE00 496 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 ANGPTL6Q8NI99 470 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 KCNG3Q8TAE7 436 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 TMEM59Q9BXS4 323 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 BANF2Q9H503 90 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 NDUFA13Q9P0J0 144 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 ST3GAL6Q9Y274 331 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 ARHGAP32A7KAX9 2087 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 MAST4O15021 2626 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 IGKV1D-17A0A075B6S4 117 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 ADAM20O43506 726 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 MPIG6BO95866 241 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 HEXAP06865 529 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 USF1P22415 310 aaPredicted RBP12.74□□□□□ -0.37
TPM1-206ENST00000358278 DUSP1P28562 367 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 RBM11P57052 281 aaKnown RBP12.74□□□□□ -0.37
TPM1-206ENST00000358278 OR10K2Q6IF99 312 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 NLRC3Q7RTR2 1065 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 Q8NFD4 153 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 CLDND2Q8NHS1 167 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 MRPS24Q96EL2 167 aaKnown RBP12.74□□□□□ -0.37
TPM1-206ENST00000358278 SELENOIQ9C0D9 397 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 ZNF701M0R085 212 aaPredicted RBP12.73□□□□□ -0.37
TPM1-206ENST00000358278 HAND1O96004 215 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 TFF1P04155 84 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 PRDX2P32119 198 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 CEBPDP49716 269 aaPredicted RBP12.73□□□□□ -0.37
TPM1-206ENST00000358278 RORCP51449 518 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 IKZF1Q13422 519 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 ZNF146Q15072 292 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 C2orf76Q3KRA6 126 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 KIAA2026Q5HYC2 2103 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 SLC36A1Q7Z2H8 476 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 OR2W3Q7Z3T1 314 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 OR51T1Q8NGJ9 327 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 RAB39BQ96DA2 213 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 CCL13Q99616 98 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 REG4Q9BYZ8 158 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 DNTTIP1Q9H147 329 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 ZNF665Q9H7R5 613 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 MIOXQ9UGB7 285 aa12.73□□□□□ -0.37
TPM1-206ENST00000358278 ACANP16112 2415 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 TMEM272A0A1B0GTI8 110 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 CYSRT1A8MQ03 144 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 SH2D1BO14796 132 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 TMEM127O75204 238 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 SNRPBP14678 240 aaKnown RBP12.72□□□□□ -0.37
TPM1-206ENST00000358278 ZNF44P15621 663 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 SOX6P35712 828 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 IL13RA1P78552 427 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 SCN1BQ07699 218 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 UNC119Q13432 240 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 IL13RA2Q14627 380 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 NHLRC3Q5JS37 347 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 LYPD2Q6UXB3 125 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 OR8B3Q8NGG8 313 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 LGALS14Q8TCE9 139 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 OR8B2Q96RD0 313 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 PATZ1Q9HBE1 687 aaKnown RBP12.72□□□□□ -0.37
TPM1-206ENST00000358278 ZNF222Q9UK12 451 aa12.72□□□□□ -0.37
TPM1-206ENST00000358278 TMEM14DPA8MWL7 114 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 GEMIN2O14893 280 aaKnown RBP12.71□□□□□ -0.37
TPM1-206ENST00000358278 OR7C1O76099 320 aaPredicted RBP12.71□□□□□ -0.37
TPM1-206ENST00000358278 PAHP00439 452 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 IGHV2-5P01817 119 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 QRFPP83859 136 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 ZNF788Q6ZQV5 615 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 LINC00596Q86U02 117 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 ZNF561Q8N587 486 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 CD177Q8N6Q3 437 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 FAM216BQ8N7L0 139 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 ASCC1Q8N9N2 400 aaKnown RBP12.71□□□□□ -0.37
TPM1-206ENST00000358278 NEIL1Q96FI4 390 aaPredicted RBP12.71□□□□□ -0.37
TPM1-206ENST00000358278 MED30Q96HR3 178 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 Q96M66 194 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 GAFA1Q96PS6 74 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 MRI1Q9BV20 369 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 BARHL1Q9BZE3 327 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 OR5V1Q9UGF6 321 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 ABCA1O95477 2261 aa12.71□□□□□ -0.37
TPM1-206ENST00000358278 SIRPB1O00241 398 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 OR2H2O95918 312 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 CHRM2P08172 466 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 GABRR1P24046 479 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 SCAND1P57086 179 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 RPS27AP62979 156 aaKnown RBP12.71□□□□□ -0.38
TPM1-206ENST00000358278 COL10A1Q03692 680 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 PDCD1Q15116 288 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 TAF9Q16594 264 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 ATPAF1Q5TC12 328 aaPredicted RBP12.71□□□□□ -0.38
TPM1-206ENST00000358278 MAPK1IP1LQ8NDC0 245 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 TMEM185AQ8NFB2 350 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 SDSLQ96GA7 329 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 URM1Q9BTM9 101 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms