RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ADH4P08319 380 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 AKAIN1P0CW23 69 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 PTBP1P26599 531 aaKnown RBP eCLIP7.81□□□□□ -1.162e-9■■■■■ 35.2
UPF2-202ENST00000357604 ZNF45Q02386 682 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 SSBP1Q04837 148 aaKnown RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 DBPQ10586 325 aaPredicted RBP7.81□□□□□ -1.16
UPF2-202ENST00000357604 ARL11Q969Q4 196 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 IL36GQ9NZH8 169 aa7.81□□□□□ -1.16
UPF2-202ENST00000357604 COL8A1P27658 744 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 GATA4P43694 442 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 DVL1P1P54792 670 aaPredicted RBP7.8□□□□□ -1.16
UPF2-202ENST00000357604 RBM11P57052 281 aaKnown RBP7.8□□□□□ -1.16
UPF2-202ENST00000357604 C9orf152Q5JTZ5 239 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 NEUROG1Q92886 237 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 AMELYQ99218 206 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 DDOQ99489 341 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 PNRC2Q9NPJ4 139 aaKnown RBP7.8□□□□□ -1.16
UPF2-202ENST00000357604 IGLV3-9A0A075B6K5 115 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 PQLC2LA1A4F0 135 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 IRF3Q14653 427 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 OR51D1Q8NGF3 324 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 ADTRPQ96IZ2 230 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 C7orf50Q9BRJ6 194 aaKnown RBP7.8□□□□□ -1.16
UPF2-202ENST00000357604 PPA2Q9H2U2 334 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 H7C2Y5 167 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 GPX5O75715 221 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 RRASP10301 218 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 C4BPBP20851 252 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 ZBTB25P24278 435 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 COX7A1P24310 79 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 FGF9P31371 208 aaPredicted RBP7.8□□□□□ -1.16
UPF2-202ENST00000357604 LCN2P80188 198 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 FHL1Q13642 323 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 ATXN7L3Q14CW9 347 aaPredicted RBP7.8□□□□□ -1.16
UPF2-202ENST00000357604 C2orf76Q3KRA6 126 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 SUMF2Q8NBJ7 301 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 OR52N4Q8NGI2 321 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 OR13C5Q8NGS8 318 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 C7orf69Q9H7B7 122 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 NCOR1O75376 2440 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 SNRNP200O75643 2136 aaKnown RBP7.8□□□□□ -1.16
UPF2-202ENST00000357604 ZSCAN5BA6NJL1 495 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 CALHM1Q8IU99 346 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 TOMM40LQ969M1 308 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 PTX4Q96A99 478 aa7.8□□□□□ -1.16
UPF2-202ENST00000357604 ADAT3Q96EY9 351 aaPredicted RBP7.8□□□□□ -1.16
UPF2-202ENST00000357604 TRIM64CA6NLI5 447 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 A8MV72 311 aaPredicted RBP7.79□□□□□ -1.16
UPF2-202ENST00000357604 LEUTXA8MZ59 168 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 ZNF736B4DX44 427 aaPredicted RBP7.79□□□□□ -1.16
UPF2-202ENST00000357604 GNRHRP30968 328 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 RAB13P51153 203 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 BIVMQ86UB2 503 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 RNF223E7ERA6 249 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 TBPP20226 339 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 GHITMQ9H3K2 345 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 PATZ1Q9HBE1 687 aaKnown RBP7.79□□□□□ -1.16
UPF2-202ENST00000357604 IDI2-AS1Q9NZ38 188 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 BET1O15155 118 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 CSN2P05814 226 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 RBMXP38159 391 aaKnown RBP7.79□□□□□ -1.16
UPF2-202ENST00000357604 MOB3BQ86TA1 216 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 BATF2Q8N1L9 274 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 PAQR4Q8N4S7 273 aaPredicted RBP7.79□□□□□ -1.16
UPF2-202ENST00000357604 OR51I2Q9H344 312 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 CACNA1HO95180 2353 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 COL27A1Q8IZC6 1860 aaPredicted RBP7.79□□□□□ -1.16
UPF2-202ENST00000357604 CPAMD8Q8IZJ3 1885 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 H0YL77 283 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 M0R1W7 72 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 ACAA1P09110 424 aaPredicted RBP7.79□□□□□ -1.16
UPF2-202ENST00000357604 CCKARP32238 428 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 SRPXP78539 464 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 FABP5Q01469 135 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 TAF9Q16594 264 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 TMEM204Q9BSN7 226 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 OPN4Q9UHM6 478 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 SPATA2Q9UM82 520 aa7.79□□□□□ -1.16
UPF2-202ENST00000357604 SRD5A1P18405 259 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 LRP11Q86VZ4 500 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 ZNF525Q8N782 197 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 OR6F1Q8NGZ6 308 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 EHFQ9NZC4 300 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 LMX1BO60663 402 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 FAM106CPP0CH98 169 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 RPS27AP62979 156 aaKnown RBP7.78□□□□□ -1.16
UPF2-202ENST00000357604 NAA40Q86UY6 237 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 SLC25A46Q96AG3 418 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 ZNF524Q96C55 264 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 SPACA5Q96QH8 159 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 HS3ST6Q96QI5 342 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 GCM1Q9NP62 436 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 COMMD9Q9P000 198 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 TRBV5-7A0A0A0MS05 114 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 SMIM30A4D0T7 59 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 TPPPO94811 219 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 OR2H2O95918 312 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 DHFRP00374 187 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 MSMO1Q15800 293 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 OR10A7Q8NGE5 316 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms