RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 TMEM52BQ4KMG9 183 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 ZNF383Q8NA42 475 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 C16orf52Q8NHV5 167 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 PLEKHB1Q9UF11 243 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 RALYQ9UKM9 306 aaKnown RBP10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 PQLC2LA1A4F0 135 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 ATF1P18846 271 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 IL24Q13007 206 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 SSX1Q16384 188 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 BSXQ3C1V8 233 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 NOXO1Q8NFA2 376 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 OR4C3Q8NH37 302 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 GMPPAQ96IJ6 420 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 PLA2G3Q9NZ20 509 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 ADAMTS5Q9UNA0 930 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 OR4C46A6NHA9 309 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 SHISA8B8ZZ34 492 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 CSN3P07498 182 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 ALX4Q9H161 411 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 ITGB4P16144 1822 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 C3orf80F5H4A9 247 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 FGF8P55075 233 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 ZNF683Q8IZ20 524 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 C5orf17Q8NAS9 161 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 NEIL1Q96FI4 390 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 V9GYH0 126 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 TRGV5A0A0B4J1U4 118 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 FGF17O60258 216 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 APELAP0DMC3 54 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 B2MP61769 119 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 TIAL1Q01085 375 aaKnown RBP eCLIP10.28□□□□□ -0.762e-6■■□□□ 13.8
SPTBN1-202ENST00000356805 SLC45A2Q9UMX9 530 aa10.28□□□□□ -0.76
SPTBN1-202ENST00000356805 DIDO1Q9BTC0 2240 aaKnown RBP10.27□□□□□ -0.76
SPTBN1-202ENST00000356805 MED19A0JLT2 244 aaPredicted RBP10.27□□□□□ -0.76
SPTBN1-202ENST00000356805 TBX19O60806 448 aa10.27□□□□□ -0.76
SPTBN1-202ENST00000356805 OR11G2Q8NGC1 345 aa10.27□□□□□ -0.76
SPTBN1-202ENST00000356805 OR52L2PQ8NGH6 319 aa10.27□□□□□ -0.76
SPTBN1-202ENST00000356805 GPX7Q96SL4 187 aaPredicted RBP10.27□□□□□ -0.76
SPTBN1-202ENST00000356805 POLR2AP24928 1970 aaKnown RBP10.27□□□□□ -0.76
SPTBN1-202ENST00000356805 CXorf51AA0A1B0GTR3 108 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 ZNF250P15622 560 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 BCL3P20749 454 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 CA6P23280 308 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 TCTAP57738 103 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 PPP1CAP62136 330 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 RPL24P83731 157 aaKnown RBP10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 FAM109BQ6ICB4 259 aaPredicted RBP10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 ALKAL1Q6UXT8 129 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 TBC1D26Q86UD7 250 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 OR1L1Q8NH94 360 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 SPSB1Q96BD6 273 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 POM121Q96HA1 1249 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 ZNF737O75373 536 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 GUCA2AQ02747 115 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 IGHV3-43A0A0B4J1X8 118 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 M0R3E3 92 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 PGA4P0DJD7 388 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 PGA5P0DJD9 388 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 IGHV3-43DP0DP04 118 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 HERVK_113P61574 105 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 SRSF9Q13242 221 aaKnown RBP eCLIP10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 TCTN1Q2MV58 587 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 MRGPRX4Q96LA9 322 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 SLC7A10Q9NS82 523 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 PSG11Q9UQ72 335 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 OR5AC1P0C628 307 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 DSCR4P56555 118 aaPredicted RBP10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 OR1C1Q15619 314 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 WFDC3Q8IUB2 231 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 KLHDC9Q8NEP7 349 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 IL22RA2Q969J5 263 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 ZBP1Q9H171 429 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 A0A1W2PN81 502 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 CDX4O14627 284 aaPredicted RBP10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 CHRNA7P36544 502 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 TMEM215Q68D42 235 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 C12orf54Q6X4T0 127 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 C20orf196Q8IYI0 205 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 CCL4L1Q8NHW4 92 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 PRR7Q8TB68 274 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 OIT3Q8WWZ8 545 aa10.27□□□□□ -0.77
SPTBN1-202ENST00000356805 OR2T8A6NH00 312 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 HOXB1P14653 301 aaPredicted RBP10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 ST6GAL1P15907 406 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 AVPR2P30518 371 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 P2RY1P47900 373 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 PPP1R1AQ13522 171 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 LGALSLQ3ZCW2 172 aaPredicted RBP10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 RNFT1Q5M7Z0 435 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 JMJD6Q6NYC1 403 aaPredicted RBP10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 ACAA1P09110 424 aaPredicted RBP10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 CD300CQ08708 224 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 ARL6IP6Q8N6S5 226 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 OR2D2Q9H210 308 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 UBE2ZQ9H832 354 aaPredicted RBP10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 DNAJC25-GNG10A0A024R161 153 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 UBE2L6O14933 153 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 CRHP06850 196 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 CEACAM16Q2WEN9 425 aa10.26□□□□□ -0.77
SPTBN1-202ENST00000356805 OR2C3Q8N628 320 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms