RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 NHLRC1Q6VVB1 395 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 OR52L2PQ8NGH6 319 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 OR2A5Q96R48 311 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 SLC6A13Q9NSD5 602 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 FBXL17Q9UF56 701 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 ARAP2Q8WZ64 1704 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 DUXBA0A1W2PPF3 345 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 hADV38S2A0JD32 116 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 TSPAN12O95859 305 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 B4GALNT1Q00973 533 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 FZD5Q13467 585 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 NKG7Q16617 165 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 Q7L0L9 218 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 NUFIP2Q7Z417 695 aaKnown RBP14.28□□□□□ -0.12
RXRA-201ENST00000356384 TM4SF19Q96DZ7 209 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 C4orf45Q96LM5 186 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 SIRT5Q9NXA8 310 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 AMMECR1Q9Y4X0 333 aaPredicted RBP14.28□□□□□ -0.12
RXRA-201ENST00000356384 Q6ZNB5 142 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 EIF4E3Q8N5X7 224 aaKnown RBP14.28□□□□□ -0.12
RXRA-201ENST00000356384 TSPAN32Q96QS1 320 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 ZNF385DQ9H6B1 395 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 KIAA0100Q14667 2235 aaKnown RBP14.28□□□□□ -0.12
RXRA-201ENST00000356384 MYH9P35579 1960 aaKnown RBP14.28□□□□□ -0.12
RXRA-201ENST00000356384 MRPL58Q14197 206 aaKnown RBP14.28□□□□□ -0.12
RXRA-201ENST00000356384 FAM219BQ5XKK7 198 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 ANKRD33Q7Z3H0 272 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 PDPNQ86YL7 162 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 GPR87Q9BY21 358 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 PRDM7Q9NQW5 492 aa14.28□□□□□ -0.12
RXRA-201ENST00000356384 DNPH1O43598 174 aa14.27□□□□□ -0.12
RXRA-201ENST00000356384 LY86O95711 162 aa14.27□□□□□ -0.12
RXRA-201ENST00000356384 UBALD2Q8IYN6 164 aa14.27□□□□□ -0.12
RXRA-201ENST00000356384 LINC01465Q8N7H1 131 aa14.27□□□□□ -0.12
RXRA-201ENST00000356384 PIK3IP1Q96FE7 263 aa14.27□□□□□ -0.12
RXRA-201ENST00000356384 ITGBL1O95965 494 aaPredicted RBP14.27□□□□□ -0.12
RXRA-201ENST00000356384 RPS4XP62701 263 aaKnown RBP14.27□□□□□ -0.12
RXRA-201ENST00000356384 HLA-DRB3P79483 266 aa14.27□□□□□ -0.12
RXRA-201ENST00000356384 IL13RA2Q14627 380 aa14.27□□□□□ -0.12
RXRA-201ENST00000356384 PDCD6O75340 191 aa14.27□□□□□ -0.13
RXRA-201ENST00000356384 KLF3P57682 345 aaPredicted RBP14.27□□□□□ -0.13
RXRA-201ENST00000356384 MRM1Q6IN84 353 aaKnown RBP14.27□□□□□ -0.13
RXRA-201ENST00000356384 DYRK2Q92630 601 aa14.27□□□□□ -0.13
RXRA-201ENST00000356384 PATE4P0C8F1 98 aa14.27□□□□□ -0.13
RXRA-201ENST00000356384 SPINK2P20155 84 aa14.27□□□□□ -0.13
RXRA-201ENST00000356384 SLC26A1Q9H2B4 701 aa14.27□□□□□ -0.13
RXRA-201ENST00000356384 COA4Q9NYJ1 87 aa14.27□□□□□ -0.13
RXRA-201ENST00000356384 PLPP2O43688 288 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 CD1BP29016 333 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 PRSS12P56730 875 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 GUSBP11Q6P575 273 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 OR1L3Q8NH93 324 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 SULT1A2P50226 295 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 ZNF141Q15928 474 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 HIST3H3Q16695 136 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 LRP11Q86VZ4 500 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 SPICQ8N5J4 248 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 OR4D10Q8NGI6 311 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 OR10D3Q8NH80 312 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 GPX7Q96SL4 187 aaPredicted RBP14.26□□□□□ -0.13
RXRA-201ENST00000356384 SLIRPQ9GZT3 109 aaKnown RBP14.26□□□□□ -0.13
RXRA-201ENST00000356384 RGS13O14921 159 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 HPXP02790 462 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 RPS4Y1P22090 263 aaKnown RBP14.26□□□□□ -0.13
RXRA-201ENST00000356384 DYNLT3P51808 116 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 OR1L1Q8NH94 360 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 CNTD2Q9H8S5 307 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 TMEFF2Q9UIK5 374 aaPredicted RBP14.26□□□□□ -0.13
RXRA-201ENST00000356384 RP1L1Q8IWN7 2480 aaPredicted RBP14.26□□□□□ -0.13
RXRA-201ENST00000356384 NKX2-2O95096 273 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 CEACAM3P40198 252 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 CRYBB2P43320 205 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 B2MP61769 119 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 DHRS13Q6UX07 377 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 TMEM108Q6UXF1 575 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 GVQW1Q8N7I0 195 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 ZNF707Q96C28 371 aaPredicted RBP14.26□□□□□ -0.13
RXRA-201ENST00000356384 DNAJB12Q9NXW2 375 aaKnown RBP14.26□□□□□ -0.13
RXRA-201ENST00000356384 GLULP15104 373 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 GABRG2P18507 467 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 POLR2GP62487 172 aaKnown RBP eCLIP14.26□□□□□ -0.13
RXRA-201ENST00000356384 PRSS54Q6PEW0 395 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 PHYHIPLQ96FC7 376 aa14.26□□□□□ -0.13
RXRA-201ENST00000356384 IGKV3-7A0A075B6H7 116 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 MELTFP08582 738 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 INHBBP09529 407 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 METAP1P53582 386 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 HERVK_113P61574 105 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 ELOBQ15370 118 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 SLC25A30Q5SVS4 291 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 R4GN57 208 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 H3BVH4 76 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 M0R143 59 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 CRISP2P16562 243 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 FGF9P31371 208 aaPredicted RBP14.25□□□□□ -0.13
RXRA-201ENST00000356384 RPL34P49207 117 aaKnown RBP14.25□□□□□ -0.13
RXRA-201ENST00000356384 ZNF253O75346 499 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 ORM1P02763 201 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 MVDP53602 400 aa14.25□□□□□ -0.13
RXRA-201ENST00000356384 ZNF793Q6ZN11 406 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms