RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 D2HGDHQ8N465 521 aa11.69□□□□□ -0.54
SCN8A-202ENST00000355133 OR10AC1Q8NH08 325 aa11.69□□□□□ -0.54
SCN8A-202ENST00000355133 RAB40CQ96S21 281 aa11.69□□□□□ -0.54
SCN8A-202ENST00000355133 TMEM208Q9BTX3 173 aa11.69□□□□□ -0.54
SCN8A-202ENST00000355133 OR5B21A6NL26 309 aa11.69□□□□□ -0.54
SCN8A-202ENST00000355133 B3GALNT1O75752 331 aa11.69□□□□□ -0.54
SCN8A-202ENST00000355133 S100A8P05109 93 aa11.69□□□□□ -0.54
SCN8A-202ENST00000355133 ORM2P19652 201 aa11.69□□□□□ -0.54
SCN8A-202ENST00000355133 RNF165Q6ZSG1 346 aa11.69□□□□□ -0.54
SCN8A-202ENST00000355133 NEIL1Q96FI4 390 aaPredicted RBP11.69□□□□□ -0.54
SCN8A-202ENST00000355133 FKBP11Q9NYL4 201 aa11.69□□□□□ -0.54
SCN8A-202ENST00000355133 PMCHP20382 165 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 GUK1Q16774 197 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 ZNF788Q6ZQV5 615 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 NHLRC2Q8NBF2 726 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 POMT1Q9Y6A1 747 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 NHSL1Q5SYE7 1610 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 TRAV38-1A0A0B4J264 116 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 CST4P01036 141 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 PNLIPP16233 465 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 BCL3P20749 454 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 PSG6Q00889 435 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 TCTE3Q8IZS6 198 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 OR6C3Q9NZP0 311 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 MBD1Q9UIS9 605 aaPredicted RBP11.68□□□□□ -0.54
SCN8A-202ENST00000355133 YTHDF2Q9Y5A9 579 aaKnown RBP11.68□□□□□ -0.54
SCN8A-202ENST00000355133 MPC1Q9Y5U8 109 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 TGOLN2O43493 480 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 TMEM18Q96B42 140 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 GLRX2Q9NS18 164 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 TEX261Q6UWH6 196 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 CD300LDQ6UXZ3 194 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 OR8B3Q8NGG8 313 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 OR8B2Q96RD0 313 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 ABHD14AQ9BUJ0 271 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 TINAGQ9UJW2 476 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 TRAPPC1Q9Y5R8 145 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 U3KQ87 197 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 FABP4P15090 132 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 AMTP48728 403 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 HMGA2P52926 109 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 ABHD3Q8WU67 409 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 COA4Q9NYJ1 87 aa11.68□□□□□ -0.54
SCN8A-202ENST00000355133 ASCC3Q8N3C0 2202 aaKnown RBP11.67□□□□□ -0.54
SCN8A-202ENST00000355133 MRPS11P82912 194 aaKnown RBP11.67□□□□□ -0.54
SCN8A-202ENST00000355133 GAB4Q2WGN9 574 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 HIKESHIQ53FT3 197 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 ATG4DQ86TL0 474 aaPredicted RBP11.67□□□□□ -0.54
SCN8A-202ENST00000355133 COMMD1Q8N668 190 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 NTNG2Q96CW9 530 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 GRAMD2BQ96HH9 432 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 CDIPTO14735 213 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 LANCL1O43813 399 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 TIPARPQ7Z3E1 657 aaKnown RBP11.67□□□□□ -0.54
SCN8A-202ENST00000355133 DPF1Q92782 380 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 WDR13Q9H1Z4 485 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 GPR27Q9NS67 375 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 PRR13Q9NZ81 148 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 SLC45A2Q9UMX9 530 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 KIR2DL1P43626 348 aaPredicted RBP11.67□□□□□ -0.54
SCN8A-202ENST00000355133 ZNF770Q6IQ21 691 aaPredicted RBP11.67□□□□□ -0.54
SCN8A-202ENST00000355133 PRSS42Q7Z5A4 293 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 OR1B1Q8NGR6 318 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 PTP4A1Q93096 173 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 PIK3IP1Q96FE7 263 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 NOL4LQ96MY1 436 aaPredicted RBP11.67□□□□□ -0.54
SCN8A-202ENST00000355133 A0A1W2PQD3 144 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 MAP1LC3B2A6NCE7 125 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 HSBP1O75506 76 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 ANKRD34CP0C6C1 535 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 FGF8P55075 233 aaPredicted RBP11.67□□□□□ -0.54
SCN8A-202ENST00000355133 PTPMT1Q8WUK0 201 aaPredicted RBP11.67□□□□□ -0.54
SCN8A-202ENST00000355133 UCN2Q96RP3 112 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 MAP1LC3BQ9GZQ8 125 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 THYN1Q9P016 225 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 DOCK1Q14185 1865 aa11.67□□□□□ -0.54
SCN8A-202ENST00000355133 PTPRZ1P23471 2315 aaPredicted RBP11.66□□□□□ -0.54
SCN8A-202ENST00000355133 PNPP00491 289 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 RAB5AP20339 215 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 TIAL1Q01085 375 aaKnown RBP eCLIP11.66□□□□□ -0.54
SCN8A-202ENST00000355133 SAP30LQ9HAJ7 183 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 C21orf140B9A014 251 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 HAND1O96004 215 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 ACTL6AO96019 429 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 SMRP1Q8NCR6 262 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 OR4D11Q8NGI4 311 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 SF3B5Q9BWJ5 86 aaKnown RBP11.66□□□□□ -0.54
SCN8A-202ENST00000355133 MS4A18H0YCH9 400 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 F2RL2O00254 374 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 GNG4P50150 75 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 MS4A18Q3C1V0 323 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 TSPO2Q5TGU0 170 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 RNASEKQ6P5S7 137 aaKnown RBP11.66□□□□□ -0.54
SCN8A-202ENST00000355133 ZAR1Q86SH2 424 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 TRAPPC4Q9Y296 219 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 SP1P08047 785 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 GALP22466 123 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 SPRED2Q7Z698 418 aa11.66□□□□□ -0.54
SCN8A-202ENST00000355133 GEMIN2O14893 280 aaKnown RBP11.66□□□□□ -0.54
SCN8A-202ENST00000355133 SFTPA2Q8IWL1 248 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms