RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 MCRIP1C9JLW8 97 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 ZNF878C9JN71 531 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 OVOL3O00110 214 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 SULT2B1O00204 365 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 MLNRO43193 412 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 TLX3O43711 291 aaPredicted RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 PITX3O75364 302 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 DHRS3O75911 302 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 GLAP06280 429 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 UBCP0CG48 685 aaKnown RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 SLC25A4P12235 298 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 CXCR1P25024 350 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 FKBP2P26885 142 aaKnown RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 CRABP1P29762 137 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 DLSTP36957 453 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 EIF1P41567 113 aaKnown RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 MAGEA5P43359 124 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 STARP49675 285 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 TNFSF10P50591 281 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 DAP3P51398 398 aaKnown RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 SSR4P51571 173 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 GLO1Q04760 184 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 IL13RA2Q14627 380 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 MPPED2Q15777 294 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 BCL2L15Q5TBC7 163 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 OR52W1Q6IF63 320 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 FAM53AQ6NSI3 398 aaPredicted RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 ZNF544Q6NX49 715 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 TMEM53Q6P2H8 277 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 BAIAP2L2Q6UXY1 529 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 TFAP2EQ6VUC0 442 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 OTOGQ6ZRI0 2925 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 GABRG1Q8N1C3 465 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 UBE2J2Q8N2K1 259 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 SLC22A24Q8N4F4 322 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 RPRMLQ8N4K4 120 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 RBMXL3Q8N7X1 1067 aaKnown RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 LRTM2Q8N967 370 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 BEST4Q8NFU0 473 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 OR5D14Q8NGL3 314 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 OR6K6Q8NGW6 343 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 OR56B4Q8NH76 319 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 FGGYQ96C11 551 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 C10orf35Q96D05 121 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 MSI2Q96DH6 328 aaKnown RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 BSCL2Q96G97 398 aaPredicted RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 SRSF8Q9BRL6 282 aaKnown RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 ZPBPQ9BS86 351 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 PECRQ9BY49 303 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 PRRG3Q9BZD7 231 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 MOB1AQ9H8S9 216 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 KRCC1Q9NPI7 259 aaPredicted RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 SLC7A10Q9NS82 523 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 MTCH1Q9NZJ7 389 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 RABL2AQ9UBK7 228 aaPredicted RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 LAMP5Q9UJQ1 280 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 RABL2BQ9UNT1 228 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 RNF115Q9Y4L5 304 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 CXorf65A6NEN9 183 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 MBD3L5A6NJ08 208 aaPredicted RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 ZNF736B4DX44 427 aaPredicted RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 G3V3Y1 287 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 PFDN1O60925 122 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 OR2C1O95371 312 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 SERPINA3P01011 423 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 CST4P01036 141 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 LHBP01229 141 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 IFNGP01579 166 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 MAS1P04201 325 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 HIST1H2ABP04908 130 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 NMBP08949 121 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 PATE4P0C8F1 98 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 COX5BP10606 129 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 CD79AP11912 226 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 GNB3P16520 340 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 PSMB1P20618 241 aaKnown RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 NPBWR2P48146 333 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 CX3CR1P49238 355 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 NOVA1P51513 510 aaKnown RBP1.94□□□□□ -2.1
VPS54-202ENST00000354504 PAX9P55771 341 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 TMPRSS3P57727 454 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 TLE3Q04726 772 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 IL18Q14116 193 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 ALKBH6Q3KRA9 238 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 SPANXN2Q5MJ10 180 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 ASPHD1Q5U4P2 390 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 C11orf87Q6NUJ2 197 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 TMEM65Q6PI78 240 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 C17orf107Q6ZR85 190 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 HIST3H2AQ7L7L0 130 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 GPAT4Q86UL3 456 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 POC1AQ8NBT0 407 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 OR10AD1Q8NGE0 317 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 OR6M1Q8NGM8 313 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 LILRB4Q8NHJ6 448 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 GRPEL2Q8TAA5 225 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 MITD1Q8WV92 249 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 AP3S1Q92572 193 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 HIST1H2ACQ93077 130 aa1.94□□□□□ -2.1
VPS54-202ENST00000354504 SFXN2Q96NB2 322 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms