RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 OR10A2Q9H208 303 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 IFT22Q9H7X7 185 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 ATPIF1Q9UII2 106 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 SSUH2Q9Y2M2 353 aa7.47□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF891A8MT65 544 aaPredicted RBP7.46□□□□□ -1.22
TRIM55-204ENST00000353317 FBXO24O75426 580 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF708P17019 499 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 FKBP2P26885 142 aaKnown RBP7.46□□□□□ -1.22
TRIM55-204ENST00000353317 SULT1A2P50226 295 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 PLGLB1Q02325 96 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 BTNL8Q6UX41 500 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 FAM57BQ71RH2 274 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 TMEM123Q8N131 208 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 NOXO1Q8NFA2 376 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 OR51T1Q8NGJ9 327 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 OR6X1Q8NH79 312 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 NPRL2Q8WTW4 380 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 KCNE4Q8WWG9 221 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 URM1Q9BTM9 101 aaKnown RBP7.46□□□□□ -1.22
TRIM55-204ENST00000353317 SPRR3Q9UBC9 169 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 KLF13Q9Y2Y9 288 aaPredicted RBP7.46□□□□□ -1.22
TRIM55-204ENST00000353317 ATRXP46100 2492 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 IGKV1D-8A0A087WSZ0 117 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 FIGNL2A6NMB9 653 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 FOXI3A8MTJ6 420 aaPredicted RBP7.46□□□□□ -1.22
TRIM55-204ENST00000353317 TAAR5O14804 337 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 IGHG1P01857 330 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 QDPRP09417 244 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 CCL1P22362 96 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 PTGER4P35408 488 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 F2RL1P55085 397 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 KISS1Q15726 138 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 TMEM268Q5VZI3 342 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 EIF5AL1Q6IS14 154 aaKnown RBP7.46□□□□□ -1.22
TRIM55-204ENST00000353317 SLC25A47Q6Q0C1 308 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 SKA3Q8IX90 412 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 OR2V1Q8NHB1 315 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 SULT4A1Q9BR01 284 aa7.46□□□□□ -1.22
TRIM55-204ENST00000353317 MYO7BQ6PIF6 2116 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 ZGRF1Q86YA3 2104 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 ARID1AO14497 2285 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 INTS1Q8N201 2190 aaKnown RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 KLRC4-KLRK1H3BQV0 150 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 LINC01387J3KSC0 135 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 EIF3GO75821 320 aaKnown RBP eCLIP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 OR8U9P0C7N5 309 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 CD46P15529 392 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 BLVRBP30043 206 aaPredicted RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 RPL12P30050 165 aaKnown RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 AKR1C3P42330 323 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 PTGFRP43088 359 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 TAS2R46P59540 309 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 HABP2Q14520 560 aaPredicted RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 IAH1Q2TAA2 248 aaPredicted RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 OR14K1Q8NGZ2 314 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 OR8U1Q8NH10 309 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 LILRB1Q8NHL6 650 aaPredicted RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 EMG1Q92979 244 aaKnown RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 AKR1E2Q96JD6 320 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 TAAR6Q96RI8 345 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 CNTNAP3Q9BZ76 1288 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 RYDENQ9NUL5 291 aaKnown RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 K7EPK0 472 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 EIF1BO60739 113 aaKnown RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 CST4P01036 141 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 APOC1P02654 83 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 SERPINA2P20848 420 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 SNRPEP62304 92 aaKnown RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 EIF5AP63241 154 aaKnown RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 AKIRIN2Q53H80 203 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 FAM76BQ5HYJ3 339 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 ABLIM2Q6H8Q1 611 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 Q6ZRG5 221 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 DOK3Q7L591 496 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 FAM71E2Q8N5Q1 922 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF283Q8N7M2 679 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 FNDC9Q8TBE3 224 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 KIRREL1Q96J84 757 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 LYZL4Q96KX0 146 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 CLCC1Q96S66 551 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 PECRQ9BY49 303 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 PARP12Q9H0J9 701 aaKnown RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 ZDHHC11Q9H8X9 412 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 RNF122Q9H9V4 155 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 PARP11Q9NR21 331 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 FBXL17Q9UF56 701 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 CACFD1Q9UGQ2 172 aa7.45□□□□□ -1.22
TRIM55-204ENST00000353317 FOXD3Q9UJU5 478 aaPredicted RBP7.45□□□□□ -1.22
TRIM55-204ENST00000353317 DHRS7CA6NNS2 312 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 DEDDO75618 318 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 IFNA2P01563 188 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 ACAA1P09110 424 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 NAT2P11245 290 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF84P51523 738 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 DVL1P1P54792 670 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 TMEM33P57088 247 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 HGFACQ04756 655 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 SLC10A1Q14973 349 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 UBE2V2Q15819 145 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms