RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 IFNA21P01568 189 aa18.81■□□□□ 0.6
SHMT1-202ENST00000352886 HLA-HP01893 362 aa18.81■□□□□ 0.6
SHMT1-202ENST00000352886 CCL2P13500 99 aa18.81■□□□□ 0.6
SHMT1-202ENST00000352886 FOXG1P55316 489 aaPredicted RBP18.81■□□□□ 0.6
SHMT1-202ENST00000352886 ABCA11PQ4W5N1 156 aa18.81■□□□□ 0.6
SHMT1-202ENST00000352886 DCAF10Q5QP82 559 aa18.81■□□□□ 0.6
SHMT1-202ENST00000352886 UQCC3Q6UW78 93 aa18.81■□□□□ 0.6
SHMT1-202ENST00000352886 LRRC46Q96FV0 321 aa18.81■□□□□ 0.6
SHMT1-202ENST00000352886 ABI3Q9P2A4 366 aa18.81■□□□□ 0.6
SHMT1-202ENST00000352886 KNTC1P50748 2209 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 RAB19A4D1S5 217 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 OR7C1O76099 320 aaPredicted RBP18.8■□□□□ 0.6
SHMT1-202ENST00000352886 CD79AP11912 226 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 FCGR2CP31995 323 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 NPBWR2P48146 333 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 ZNF273Q14593 569 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 SP6Q3SY56 376 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 OR56B2PQ8NGI1 322 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 PAPOLGQ9BWT3 736 aaKnown RBP18.8■□□□□ 0.6
SHMT1-202ENST00000352886 ZNF286AQ9HBT8 521 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 ZC4H2Q9NQZ6 224 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 ATPIF1Q9UII2 106 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 KCNIP3Q9Y2W7 256 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 SHANK1Q9Y566 2161 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 SYNGR4O95473 234 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 HKR1P10072 659 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 AKR1C2P52895 323 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 AKR1C1Q04828 323 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 RTN4IP1Q8WWV3 396 aaPredicted RBP18.8■□□□□ 0.6
SHMT1-202ENST00000352886 ZNF442Q9H7R0 627 aa18.8■□□□□ 0.6
SHMT1-202ENST00000352886 C5orf49A4QMS7 147 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 C21orf140B9A014 251 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 OR5AC1P0C628 307 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 FAM157CP0CG43 387 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 SPEM2Q0P670 501 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 Q6ZPA2 131 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 NAA60Q9H7X0 242 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 TUBD1Q9UJT1 453 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 TOR1AO14656 332 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 DAZAP2Q15038 168 aaPredicted RBP18.79■□□□□ 0.6
SHMT1-202ENST00000352886 OR2A2Q6IF42 318 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 PRRG4Q9BZD6 226 aa18.79■□□□□ 0.6
SHMT1-202ENST00000352886 NCOR1O75376 2440 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 ZNF503-AS2A6NEH8 195 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 RPL36A-HNRNPH2H7BZ11 118 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 ACTL6AO96019 429 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 SP9P0CG40 484 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 CD59P13987 128 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 FUT3P21217 361 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 PHLDA2Q53GA4 152 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 RPL7L1Q6DKI1 246 aaKnown RBP18.78■□□□□ 0.6
SHMT1-202ENST00000352886 TMEM251Q8N6I4 163 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 REPIN1Q9BWE0 567 aaKnown RBP18.78■□□□□ 0.6
SHMT1-202ENST00000352886 DEDDO75618 318 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 ADAMTS17Q8TE56 1095 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 ARL11Q969Q4 196 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 SLC2A9Q9NRM0 540 aa18.78■□□□□ 0.6
SHMT1-202ENST00000352886 LSM5Q9Y4Y9 91 aaKnown RBP18.78■□□□□ 0.6
SHMT1-202ENST00000352886 ZNF705EA8MWA4 302 aaPredicted RBP18.77■□□□□ 0.6
SHMT1-202ENST00000352886 K7EPK0 472 aa18.77■□□□□ 0.6
SHMT1-202ENST00000352886 SCGB1D2O95969 90 aa18.77■□□□□ 0.6
SHMT1-202ENST00000352886 RPL12P30050 165 aaKnown RBP18.77■□□□□ 0.6
SHMT1-202ENST00000352886 PLGLB1Q02325 96 aa18.77■□□□□ 0.6
SHMT1-202ENST00000352886 TMEM187Q14656 261 aa18.77■□□□□ 0.6
SHMT1-202ENST00000352886 SMCO1Q147U7 214 aa18.77■□□□□ 0.6
SHMT1-202ENST00000352886 FAM71E2Q8N5Q1 922 aa18.77■□□□□ 0.6
SHMT1-202ENST00000352886 GALNT14Q96FL9 552 aa18.77■□□□□ 0.6
SHMT1-202ENST00000352886 CRIM1Q9NZV1 1036 aa18.77■□□□□ 0.6
SHMT1-202ENST00000352886 TAAR5O14804 337 aa18.76■□□□□ 0.59
SHMT1-202ENST00000352886 GLI4P10075 376 aa18.76■□□□□ 0.59
SHMT1-202ENST00000352886 PRDX4Q13162 271 aa18.76■□□□□ 0.59
SHMT1-202ENST00000352886 TMEM211Q6ICI0 200 aa18.76■□□□□ 0.59
SHMT1-202ENST00000352886 TAF9BQ9HBM6 251 aa18.76■□□□□ 0.59
SHMT1-202ENST00000352886 LPAR3Q9UBY5 353 aa18.76■□□□□ 0.59
SHMT1-202ENST00000352886 STARD10Q9Y365 291 aa18.76■□□□□ 0.59
SHMT1-202ENST00000352886 PQLC2LA1A4F0 135 aa18.76■□□□□ 0.59
SHMT1-202ENST00000352886 RCC1P18754 421 aaPredicted RBP18.76■□□□□ 0.59
SHMT1-202ENST00000352886 OR5L1Q8NGL2 311 aa18.76■□□□□ 0.59
SHMT1-202ENST00000352886 TMEM218A2RU14 115 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 BCL3P20749 454 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 GLP1RP43220 463 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 C3AR1Q16581 482 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 MRPL21Q7Z2W9 205 aaKnown RBP18.75■□□□□ 0.59
SHMT1-202ENST00000352886 OR10Z1Q8NGY1 313 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 SLAMF9Q96A28 289 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 APH1AQ96BI3 265 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 MOB3AQ96BX8 217 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 PRRX2Q99811 253 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 FGF23Q9GZV9 251 aaPredicted RBP18.75■□□□□ 0.59
SHMT1-202ENST00000352886 IL17BQ9UHF5 180 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 ABCD4O14678 606 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 HAAOP46952 286 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 GPM6AP51674 278 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 EIF5AP63241 154 aaKnown RBP18.75■□□□□ 0.59
SHMT1-202ENST00000352886 OR11L1Q8NGX0 322 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 HPSE2Q8WWQ2 592 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 ZNF629Q9UEG4 869 aaPredicted RBP18.75■□□□□ 0.59
SHMT1-202ENST00000352886 DOCK7Q96N67 2140 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 ARHGAP21Q5T5U3 1957 aa18.75■□□□□ 0.59
SHMT1-202ENST00000352886 PCP4L1A6NKN8 68 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms