RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 FAM90A16PA6NEW6 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A20PA6NIJ5 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A8PA6NJQ4 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A7PA6NKC0 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 ZNF705EA8MWA4 302 aaPredicted RBP19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A22PA8MWA6 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A12PA8MX19 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A5PA8MXJ8 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A23PA8MXZ1 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 ABCD4O14678 606 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 NUPL2O15504 423 aaKnown RBP19.09■□□□□ 0.65
UPF3A-201ENST00000351487 CELA3AP09093 270 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 OR5AC1P0C628 307 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A15PP0C7V4 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A13PP0C7W8 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A14PP0C7W9 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A24PP0C7X0 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 COX5BP10606 129 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FCGR2CP31995 323 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FOXRED2Q8IWF2 684 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 REPIN1Q9BWE0 567 aaKnown RBP19.09■□□□□ 0.65
UPF3A-201ENST00000351487 TAF9BQ9HBM6 251 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 STARD10Q9Y365 291 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM221AA4D161 298 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 C21orf140B9A014 251 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 ADCYAP1P18509 176 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 C10orf91Q5T1B1 145 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 TMEM268Q5VZI3 342 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 OR2A2Q6IF42 318 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 OR4A4PQ8NGN8 299 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 SHANK1Q9Y566 2161 aa19.08■□□□□ 0.65
UPF3A-201ENST00000351487 PQLC2LA1A4F0 135 aa19.08■□□□□ 0.65
UPF3A-201ENST00000351487 CST4P01036 141 aa19.08■□□□□ 0.65
UPF3A-201ENST00000351487 SRYQ05066 204 aa19.08■□□□□ 0.65
UPF3A-201ENST00000351487 SLC25A26Q70HW3 274 aa19.08■□□□□ 0.65
UPF3A-201ENST00000351487 OR56B2PQ8NGI1 322 aa19.08■□□□□ 0.65
UPF3A-201ENST00000351487 ARRDC1-AS1Q9H2J1 176 aa19.08■□□□□ 0.65
UPF3A-201ENST00000351487 A0A1W2PNU3 283 aaPredicted RBP19.08■□□□□ 0.64
UPF3A-201ENST00000351487 CDK2AP1O14519 115 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 ZNF205O95201 554 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 RFC3P40938 356 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 GLP1RP43220 463 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 FXYD4P59646 89 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 PJVKQ0ZLH3 352 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 TUSC5Q8IXB3 177 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 HES7Q9BYE0 225 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 PLEKHA2Q9HB19 425 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 ZC4H2Q9NQZ6 224 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 ABI3Q9P2A4 366 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 AMDHD2Q9Y303 409 aa19.08■□□□□ 0.64
UPF3A-201ENST00000351487 DMDP11532 3685 aa19.07■□□□□ 0.64
UPF3A-201ENST00000351487 ARHGDIBP52566 201 aa19.07■□□□□ 0.64
UPF3A-201ENST00000351487 CDCP2Q5VXM1 449 aa19.07■□□□□ 0.64
UPF3A-201ENST00000351487 LIAT1Q6ZQX7 453 aa19.07■□□□□ 0.64
UPF3A-201ENST00000351487 Q6ZS49 121 aa19.07■□□□□ 0.64
UPF3A-201ENST00000351487 SVBPQ8N300 66 aa19.07■□□□□ 0.64
UPF3A-201ENST00000351487 C18orf12Q96KH6 178 aa19.07■□□□□ 0.64
UPF3A-201ENST00000351487 TSNAXQ99598 290 aaKnown RBP19.07■□□□□ 0.64
UPF3A-201ENST00000351487 PAPOLGQ9BWT3 736 aaKnown RBP19.07■□□□□ 0.64
UPF3A-201ENST00000351487 TTTY12Q9BZ98 90 aa19.07■□□□□ 0.64
UPF3A-201ENST00000351487 ZNF442Q9H7R0 627 aa19.07■□□□□ 0.64
UPF3A-201ENST00000351487 RNF122Q9H9V4 155 aa19.07■□□□□ 0.64
UPF3A-201ENST00000351487 ZNF629Q9UEG4 869 aaPredicted RBP19.07■□□□□ 0.64
UPF3A-201ENST00000351487 CARHSP1Q9Y2V2 147 aaKnown RBP19.07■□□□□ 0.64
UPF3A-201ENST00000351487 FAM74A7A6NL05 159 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 H7C1Q1 480 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 LRP3O75074 770 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 OR7C1O76099 320 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-201ENST00000351487 SYNGR4O95473 234 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 NPBWR2P48146 333 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 AKR1C2P52895 323 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 AKR1C1Q04828 323 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 OR1C1Q15619 314 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 SP6Q3SY56 376 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 FAM74A3Q4VXF1 159 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 SAXO1Q8IYX7 474 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 SYT3Q9BQG1 590 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 RSRP1Q9BUV0 290 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 FBXL17Q9UF56 701 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 AHCTF1Q8WYP5 2266 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 LNP1A1A4G5 178 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 ZNF724A8MTY0 619 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 JTBO76095 146 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 RCC1P18754 421 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-201ENST00000351487 SULT1A2P50226 295 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 DCAF10Q5QP82 559 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 DEFB123Q8N688 67 aa19.06■□□□□ 0.64
UPF3A-201ENST00000351487 MSI2Q96DH6 328 aaKnown RBP19.06■□□□□ 0.64
UPF3A-201ENST00000351487 LSM5Q9Y4Y9 91 aaKnown RBP19.06■□□□□ 0.64
UPF3A-201ENST00000351487 ARID1AO14497 2285 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 TOR1AO14656 332 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 SS18L1O75177 396 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-201ENST00000351487 MAGEA5P43359 124 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 PDCD1Q15116 288 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 PHLDA2Q53GA4 152 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 GLYATL2Q8WU03 294 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 CALHM2Q9HA72 323 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 PLSCR2Q9NRY7 297 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 A0A096LPE4 126 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 A0A1W2PPZ6 126 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms