RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CALHM1Q8IU99 346 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 FDCSPQ8NFU4 85 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 SLAMF9Q96A28 289 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 METTL9Q9H1A3 318 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 TLN1Q9Y490 2541 aaKnown RBP12.05□□□□□ -0.48
TRIM4-201ENST00000349062 SPENQ96T58 3664 aaKnown RBP12.05□□□□□ -0.48
TRIM4-201ENST00000349062 TRAV39A0A0B4J263 110 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 A0A1B0GV50 99 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 TXNL1O43396 289 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 CYC1P08574 325 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 WT1P19544 449 aaPredicted RBP12.05□□□□□ -0.48
TRIM4-201ENST00000349062 THBS4P35443 961 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 MEOX2P50222 304 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 IDH3GP51553 393 aaPredicted RBP12.05□□□□□ -0.48
TRIM4-201ENST00000349062 KCNMB1Q16558 191 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 ADGRG7Q96K78 797 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 PIGMQ9H3S5 423 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 NIT2Q9NQR4 276 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 DHRS7CA6NNS2 312 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 C21orf140B9A014 251 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 APOC1P02654 83 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 SERPINF1P36955 418 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 HOXA4Q00056 320 aaPredicted RBP12.04□□□□□ -0.48
TRIM4-201ENST00000349062 HFEQ30201 348 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 LYPD6Q86Y78 171 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 HAS2Q92819 552 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 MRGPRFQ96AM1 343 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 CNTNAP3BQ96NU0 1288 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 ZNF2Q9BSG1 426 aaPredicted RBP12.04□□□□□ -0.48
TRIM4-201ENST00000349062 ZNF552Q9H707 407 aaPredicted RBP12.04□□□□□ -0.48
TRIM4-201ENST00000349062 FN3KRPQ9HA64 309 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 NDRG3Q9UGV2 375 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 FZR1Q9UM11 496 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 STARD10Q9Y365 291 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 CYTIPO60759 359 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 ACTL6AO96019 429 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 CPT2P23786 658 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 SMCO1Q147U7 214 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 RBMS3Q6XE24 437 aaKnown RBP12.04□□□□□ -0.48
TRIM4-201ENST00000349062 ETV3LQ6ZN32 361 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 INTS12Q96CB8 462 aaKnown RBP12.04□□□□□ -0.48
TRIM4-201ENST00000349062 TRIB1Q96RU8 372 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 PHB2Q99623 299 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 TRGV5A0A0B4J1U4 118 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 C9orf170A2RU37 121 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 BCL2L11O43521 198 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 FBXO24O75426 580 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 CST2P09228 141 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 PLP2Q04941 152 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 CLN3Q13286 438 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 OR2T2Q6IF00 324 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 ACOT7LQ6ZUV0 252 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 TERB2Q8NHR7 220 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 PP6455Q8WZ26 134 aa12.04□□□□□ -0.48
TRIM4-201ENST00000349062 PLCE1Q9P212 2302 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 ADGRG4Q8IZF6 3080 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 LINC00587B1AMM8 73 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 CALCRP30988 508 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 HOXA1P49639 335 aaPredicted RBP12.03□□□□□ -0.48
TRIM4-201ENST00000349062 FAM3AP98173 230 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 C17orf78Q8N4C9 275 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 ZNF611Q8N823 705 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 RXFP4Q8TDU9 374 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 HS3ST6Q96QI5 342 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 C20orf24Q9BUV8 137 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 SPRY4Q9C004 299 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 ZGRF1Q86YA3 2104 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 HS3ST1O14792 307 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 LILRA1O75019 489 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 CTAG1AP78358 180 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 ZNF585AQ6P3V2 769 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 KCNRGQ8N5I3 272 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 STOML3Q8TAV4 291 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 SULT4A1Q9BR01 284 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 ZMAT5Q9UDW3 170 aaKnown RBP12.03□□□□□ -0.48
TRIM4-201ENST00000349062 KLF13Q9Y2Y9 288 aaPredicted RBP12.03□□□□□ -0.48
TRIM4-201ENST00000349062 CHD8Q9HCK8 2581 aa12.03□□□□□ -0.48
TRIM4-201ENST00000349062 TRBV23-1A0A0A0MS06 115 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 IGKV1-12A0A0C4DH73 117 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 A0A0U1RQV5 110 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 F8VVB4 439 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 F8VWA3 439 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 IGKV1D-12P01611 117 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 ADCYAP1P18509 176 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 PCBD1P61457 104 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 AVPI1Q5T686 147 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 CLEC9AQ6UXN8 241 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 LYG2Q86SG7 212 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 CXorf67Q86X51 503 aaPredicted RBP12.02□□□□□ -0.48
TRIM4-201ENST00000349062 OR13G1Q8NGZ3 307 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 AK3Q9UIJ7 227 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 NCOR2Q9Y618 2525 aa12.02□□□□□ -0.48
TRIM4-201ENST00000349062 OR6C6A6NF89 314 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 SLC22A20A6NK97 555 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 NXPH3O95157 252 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 CELA3BP08861 270 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 CRYGSP22914 178 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 NOVA1P51513 510 aaKnown RBP12.02□□□□□ -0.49
TRIM4-201ENST00000349062 KRBOX4Q5JUW0 171 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 SFT2D1Q8WV19 159 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms