RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 GRB2P62993 217 aaKnown RBP15.56■□□□□ 0.08
APP-202ENST00000348990 TVP23CQ96ET8 276 aa15.56■□□□□ 0.08
APP-202ENST00000348990 SSX3Q99909 188 aa15.56■□□□□ 0.08
APP-202ENST00000348990 GNG13Q9P2W3 67 aa15.56■□□□□ 0.08
APP-202ENST00000348990 CCDC187A0A096LP49 1063 aa15.55■□□□□ 0.08
APP-202ENST00000348990 NKX2-6A6NCS4 301 aa15.55■□□□□ 0.08
APP-202ENST00000348990 ZNF814B7Z6K7 855 aa15.55■□□□□ 0.08
APP-202ENST00000348990 C5orf67F2Z3F1 127 aa15.55■□□□□ 0.08
APP-202ENST00000348990 EFNA2O43921 213 aa15.55■□□□□ 0.08
APP-202ENST00000348990 PGA4P0DJD7 388 aa15.55■□□□□ 0.08
APP-202ENST00000348990 PGA3P0DJD8 388 aa15.55■□□□□ 0.08
APP-202ENST00000348990 KHDC3LQ587J8 217 aa15.55■□□□□ 0.08
APP-202ENST00000348990 KDF1Q8NAX2 398 aaPredicted RBP15.55■□□□□ 0.08
APP-202ENST00000348990 MTIF3Q9H2K0 278 aaKnown RBP15.55■□□□□ 0.08
APP-202ENST00000348990 TRBV11-1A0A0K0K1C0 115 aa15.55■□□□□ 0.08
APP-202ENST00000348990 SOD3P08294 240 aa15.55■□□□□ 0.08
APP-202ENST00000348990 CSNK1A1P48729 337 aa15.55■□□□□ 0.08
APP-202ENST00000348990 IL13RA2Q14627 380 aa15.55■□□□□ 0.08
APP-202ENST00000348990 CCDC54Q8NEL0 328 aa15.55■□□□□ 0.08
APP-202ENST00000348990 HS3ST3B1Q9Y662 390 aa15.55■□□□□ 0.08
APP-202ENST00000348990 IGHV3-15A0A0B4J1V0 119 aa15.55■□□□□ 0.08
APP-202ENST00000348990 H3BP45 60 aa15.55■□□□□ 0.08
APP-202ENST00000348990 PNLIPP16233 465 aa15.55■□□□□ 0.08
APP-202ENST00000348990 TLE1Q04724 770 aa15.55■□□□□ 0.08
APP-202ENST00000348990 ELOBQ15370 118 aa15.55■□□□□ 0.08
APP-202ENST00000348990 PRAMEF20Q5VT98 475 aa15.55■□□□□ 0.08
APP-202ENST00000348990 CMTM1Q8IZ96 169 aa15.55■□□□□ 0.08
APP-202ENST00000348990 LYZL4Q96KX0 146 aa15.55■□□□□ 0.08
APP-202ENST00000348990 SNX22Q96L94 193 aa15.55■□□□□ 0.08
APP-202ENST00000348990 MRPL13Q9BYD1 178 aaKnown RBP15.55■□□□□ 0.08
APP-202ENST00000348990 C2orf16Q68DN1 1984 aa15.55■□□□□ 0.08
APP-202ENST00000348990 SMCO3A2RU48 225 aa15.54■□□□□ 0.08
APP-202ENST00000348990 DHRS3O75911 302 aa15.54■□□□□ 0.08
APP-202ENST00000348990 RBP2P50120 134 aa15.54■□□□□ 0.08
APP-202ENST00000348990 ZNF133P52736 654 aaPredicted RBP15.54■□□□□ 0.08
APP-202ENST00000348990 HNF4GQ14541 408 aa15.54■□□□□ 0.08
APP-202ENST00000348990 RTL6Q6ICC9 239 aa15.54■□□□□ 0.08
APP-202ENST00000348990 ZNF574Q6ZN55 896 aaPredicted RBP15.54■□□□□ 0.08
APP-202ENST00000348990 C14orf144Q96I85 54 aa15.54■□□□□ 0.08
APP-202ENST00000348990 TRIOO75962 3097 aa15.54■□□□□ 0.08
APP-202ENST00000348990 ZNF705GA8MUZ8 300 aaPredicted RBP15.54■□□□□ 0.08
APP-202ENST00000348990 EPHA1P21709 976 aa15.54■□□□□ 0.08
APP-202ENST00000348990 SSX2Q16385 188 aa15.54■□□□□ 0.08
APP-202ENST00000348990 BTBD17A6NE02 478 aa15.53■□□□□ 0.08
APP-202ENST00000348990 K7N7A8 449 aa15.53■□□□□ 0.08
APP-202ENST00000348990 SUCLG1P53597 346 aaKnown RBP15.53■□□□□ 0.08
APP-202ENST00000348990 CLEC12BQ2HXU8 276 aa15.53■□□□□ 0.08
APP-202ENST00000348990 PIGYQ3MUY2 71 aa15.53■□□□□ 0.08
APP-202ENST00000348990 SNIP1Q8TAD8 396 aaKnown RBP15.53■□□□□ 0.08
APP-202ENST00000348990 BORCS8Q96FH0 119 aa15.53■□□□□ 0.08
APP-202ENST00000348990 FAM210BQ96KR6 192 aa15.53■□□□□ 0.08
APP-202ENST00000348990 OR5H1A6NKK0 313 aa15.53■□□□□ 0.08
APP-202ENST00000348990 M0R135 149 aa15.53■□□□□ 0.08
APP-202ENST00000348990 GEMIN2O14893 280 aaKnown RBP15.53■□□□□ 0.08
APP-202ENST00000348990 OR2J2O76002 312 aa15.53■□□□□ 0.08
APP-202ENST00000348990 OR7C1O76099 320 aaPredicted RBP15.53■□□□□ 0.08
APP-202ENST00000348990 SCAF4O95104 1147 aaKnown RBP15.53■□□□□ 0.08
APP-202ENST00000348990 TRGC1P0CF51 173 aa15.53■□□□□ 0.08
APP-202ENST00000348990 ZNF799Q96GE5 643 aa15.53■□□□□ 0.08
APP-202ENST00000348990 REV3LO60673 3130 aa15.53■□□□□ 0.08
APP-202ENST00000348990 SSTP61278 116 aa15.53■□□□□ 0.08
APP-202ENST00000348990 HIKESHIQ53FT3 197 aa15.53■□□□□ 0.08
APP-202ENST00000348990 HIST2H3PS2Q5TEC6 136 aa15.53■□□□□ 0.08
APP-202ENST00000348990 C1QL4Q86Z23 238 aa15.53■□□□□ 0.08
APP-202ENST00000348990 FBXL14Q8N1E6 418 aa15.53■□□□□ 0.08
APP-202ENST00000348990 CCDC71LQ8N9Z2 235 aa15.53■□□□□ 0.08
APP-202ENST00000348990 GJC3Q8NFK1 279 aa15.53■□□□□ 0.08
APP-202ENST00000348990 NEK7Q8TDX7 302 aa15.53■□□□□ 0.08
APP-202ENST00000348990 CPNE4Q96A23 557 aaPredicted RBP15.53■□□□□ 0.08
APP-202ENST00000348990 LRFN1Q9P244 771 aa15.53■□□□□ 0.08
APP-202ENST00000348990 PTPRSQ13332 1948 aa15.53■□□□□ 0.08
APP-202ENST00000348990 H3BMH7 237 aa15.52■□□□□ 0.08
APP-202ENST00000348990 HLA-HP01893 362 aa15.52■□□□□ 0.08
APP-202ENST00000348990 LCATP04180 440 aa15.52■□□□□ 0.08
APP-202ENST00000348990 CXorf66Q5JRM2 361 aaPredicted RBP15.52■□□□□ 0.08
APP-202ENST00000348990 C7orf61Q8IZ16 206 aa15.52■□□□□ 0.08
APP-202ENST00000348990 LILRB2Q8N423 598 aa15.52■□□□□ 0.08
APP-202ENST00000348990 ARV1Q9H2C2 271 aa15.52■□□□□ 0.08
APP-202ENST00000348990 ZNF286AQ9HBT8 521 aa15.52■□□□□ 0.08
APP-202ENST00000348990 CD207Q9UJ71 328 aa15.52■□□□□ 0.08
APP-202ENST00000348990 LAMA1P25391 3075 aa15.52■□□□□ 0.08
APP-202ENST00000348990 TRAF3IP2O43734 574 aaPredicted RBP15.52■□□□□ 0.07
APP-202ENST00000348990 SRP19P09132 144 aaKnown RBP15.52■□□□□ 0.07
APP-202ENST00000348990 HIST1H1BP16401 226 aaKnown RBP15.52■□□□□ 0.07
APP-202ENST00000348990 DDTP30046 118 aa15.52■□□□□ 0.07
APP-202ENST00000348990 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.52■□□□□ 0.07
APP-202ENST00000348990 LCN15Q6UWW0 184 aa15.52■□□□□ 0.07
APP-202ENST00000348990 OR10G3Q8NGC4 313 aa15.52■□□□□ 0.07
APP-202ENST00000348990 GALNT14Q96FL9 552 aa15.52■□□□□ 0.07
APP-202ENST00000348990 TP53RKQ96S44 253 aa15.52■□□□□ 0.07
APP-202ENST00000348990 IGSF23A1L1A6 192 aa15.52■□□□□ 0.07
APP-202ENST00000348990 FASLGP48023 281 aa15.52■□□□□ 0.07
APP-202ENST00000348990 DYNLT3P51808 116 aa15.52■□□□□ 0.07
APP-202ENST00000348990 RPS18P62269 152 aaKnown RBP15.52■□□□□ 0.07
APP-202ENST00000348990 Q3ZCU0 254 aa15.52■□□□□ 0.07
APP-202ENST00000348990 UNQ6494/PRO21346Q6UXR6 183 aa15.52■□□□□ 0.07
APP-202ENST00000348990 PHOSPHO2Q8TCD6 241 aa15.52■□□□□ 0.07
APP-202ENST00000348990 PP6455Q8WZ26 134 aa15.52■□□□□ 0.07
APP-202ENST00000348990 FRZBQ92765 325 aa15.52■□□□□ 0.07
APP-202ENST00000348990 PACRGQ96M98 296 aaPredicted RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms