RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SLC38A9Q8NBW4 561 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 ASB10Q8WXI3 467 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 TPSD1Q9BZJ3 242 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 MED12Q93074 2177 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 A0A1B0GU03 582 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 SERPINE3A8MV23 424 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 MS4A18H0YCH9 400 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 ADH1BP00325 375 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 EDN3P14138 238 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 RAB4AP20338 218 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 EPHA1P21709 976 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 DYNLT3P51808 116 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 VAMP2P63027 116 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 MS4A18Q3C1V0 323 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 CARD17Q5XLA6 110 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 LCN15Q6UWW0 184 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 C20orf196Q8IYI0 205 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 RNASEH2CQ8TDP1 164 aaKnown RBP13.4□□□□□ -0.26
LMNA-201ENST00000347559 RCC1LQ96I51 464 aaKnown RBP13.4□□□□□ -0.26
LMNA-201ENST00000347559 SLC2A9Q9NRM0 540 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 NKX2-6A6NCS4 301 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 OPN1LWP04000 364 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 ZNF17P17021 662 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 TDGF1P3P51864 188 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 FGF8P55075 233 aaPredicted RBP13.39□□□□□ -0.27
LMNA-201ENST00000347559 TLE3Q04726 772 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 BATFQ16520 125 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 RSPO4Q2I0M5 234 aaPredicted RBP13.39□□□□□ -0.27
LMNA-201ENST00000347559 ARMC6Q6NXE6 501 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 BTNL3Q6UXE8 466 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 SLC16A14Q7RTX9 510 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 PRSS58Q8IYP2 241 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 MRPL43Q8N983 215 aaKnown RBP13.39□□□□□ -0.27
LMNA-201ENST00000347559 ADAMTS18Q8TE60 1221 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 VWCEQ96DN2 955 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 GPR173Q9NS66 373 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 ZNF581Q9P0T4 197 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 C5orf63A6NC05 138 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 B4DEV8 164 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 RER1O15258 196 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 GCGP01275 180 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 ECI1P42126 302 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 TLE4Q04727 773 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 ADIRFQ15847 76 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 TMEM31Q5JXX7 168 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 FAM89BQ8N5H3 189 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 ADGRG7Q96K78 797 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 KCNK17Q96T54 332 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 H3BML4 177 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 TGOLN2O43493 480 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 HLA-HP01893 362 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 ZNF43P17038 809 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 HSF1Q00613 529 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 HERPUD1Q15011 391 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 FAM90A2PQ658T7 463 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 OR10J5Q8NHC4 309 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 OPN3Q9H1Y3 402 aaPredicted RBP13.39□□□□□ -0.27
LMNA-201ENST00000347559 ZNF665Q9H7R5 613 aa13.39□□□□□ -0.27
LMNA-201ENST00000347559 DLEU1O43261 78 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 OPN1MWP04001 364 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 OPN1MW2P0DN77 364 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 OPN1MW3P0DN78 364 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 NKX2-1P43699 371 aaPredicted RBP13.38□□□□□ -0.27
LMNA-201ENST00000347559 OR1D4P47884 311 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 HLA-DQA1Q5Y7H0 255 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 PTPMT1Q8WUK0 201 aaPredicted RBP13.38□□□□□ -0.27
LMNA-201ENST00000347559 SYT3Q9BQG1 590 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 NKX2-4Q9H2Z4 354 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 CDH20Q9HBT6 801 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 GLRX2Q9NS18 164 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 LANCL2Q9NS86 450 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 NPIPB7O75200 414 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 DAP3P51398 398 aaKnown RBP13.38□□□□□ -0.27
LMNA-201ENST00000347559 RND2P52198 227 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 TMEM252Q8N6L7 170 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 DTD1Q8TEA8 209 aa13.38□□□□□ -0.27
LMNA-201ENST00000347559 RBMXL1Q96E39 390 aaKnown RBP13.38□□□□□ -0.27
LMNA-201ENST00000347559 TRBV24-1A0A075B6N3 115 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 TK1P04183 234 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 MRPS34P82930 218 aaKnown RBP13.37□□□□□ -0.27
LMNA-201ENST00000347559 PLCXD2Q0VAA5 305 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 ZNF154Q13106 437 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 CXorf66Q5JRM2 361 aaPredicted RBP13.37□□□□□ -0.27
LMNA-201ENST00000347559 ZNF776Q68DI1 518 aaPredicted RBP13.37□□□□□ -0.27
LMNA-201ENST00000347559 TSLPQ969D9 159 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 C18orf12Q96KH6 178 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 GPHA2Q96T91 129 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 LHFPL6Q9Y693 200 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 LOC102723971A0A1B0GUV8 181 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 ANGPTL7O43827 346 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 FGF5P12034 268 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 FAHP16930 419 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 IGLV3-21P80748 117 aaPredicted RBP13.37□□□□□ -0.27
LMNA-201ENST00000347559 ARL6IP1Q15041 203 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 MSI2Q96DH6 328 aaKnown RBP13.37□□□□□ -0.27
LMNA-201ENST00000347559 NECAP2Q9NVZ3 263 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 VDAC3Q9Y277 283 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 SZT2Q5T011 3432 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 A6NCN8 305 aa13.37□□□□□ -0.27
LMNA-201ENST00000347559 SHISA8B8ZZ34 492 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms