RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SYT3Q9BQG1 590 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 ST6GALNAC5Q9BVH7 336 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 TLNRD1Q9H1K6 362 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 SLC2A8Q9NY64 477 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 FLVCR2Q9UPI3 526 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 A0A1B0GUH1 482 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 C7orf66A4D0T2 115 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 PRAF2O60831 178 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 DTYMKP23919 212 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 ERVK11-1P61568 191 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 BSPH1Q075Z2 132 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 MAB21L1Q13394 359 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 BEST4Q8NFU0 473 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 SLC6A7Q99884 636 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 SLC25A21Q9BQT8 299 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 CHST6Q9GZX3 395 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 ZNF442Q9H7R0 627 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 SPACA1Q9HBV2 294 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 RCC2Q9P258 522 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 EDARQ9UNE0 448 aa18.23■□□□□ 0.51
TSPAN3-202ENST00000346495 DSPP15924 2871 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 POLEQ07864 2286 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 PLSCR5A0PG75 271 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 NOS1APO75052 506 aaPredicted RBP18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 IFNA6P05013 189 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 TAS2R46P59540 309 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 IKZF1Q13422 519 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 VAX1Q5SQQ9 334 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 SLC22A25Q6T423 547 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 IDO2Q6ZQW0 420 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 OR2Z1Q8NG97 314 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 GIMAP1Q8WWP7 306 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 MRPL24Q96A35 216 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 NRIP2Q9BQI9 281 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 ZNF701Q9NV72 531 aaPredicted RBP18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 IL36RNQ9UBH0 155 aa18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 ERRFI1Q9UJM3 462 aaPredicted RBP18.22■□□□□ 0.51
TSPAN3-202ENST00000346495 A0A0A6YYJ9 748 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 UBE2QL1A1L167 161 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 PMP2P02689 132 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 CSN2P05814 226 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 CD200P41217 278 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 MECP2P51608 486 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 NKPD1Q17RQ9 610 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 MICBQ29980 383 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 BRICD5Q6PL45 260 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 POC1AQ8NBT0 407 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 OR5H2Q8NGV7 314 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 HDHD3Q9BSH5 251 aaPredicted RBP18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 MRPL37Q9BZE1 423 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 CA10Q9NS85 328 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 NDRG3Q9UGV2 375 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 ZNF230Q9UIE0 474 aaPredicted RBP18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 ZZEF1O43149 2961 aa18.21■□□□□ 0.51
TSPAN3-202ENST00000346495 NKX2-6A6NCS4 301 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 A6NLC8 198 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 SCGB2B2Q4G0G5 96 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 C11orf53Q8IXP5 236 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 CA5BP1Q8WTZ4 195 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 GHITMQ9H3K2 345 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 ESRP2Q9H6T0 727 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 IFT22Q9H7X7 185 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 TAAR3PQ9P1P4 343 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 ATP23Q9Y6H3 246 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 IGHV3-64DA0A0J9YX35 117 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 ZSCAN5BA6NJL1 495 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 PYCARD-AS1I3L0S3 204 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 ATXN7O15265 892 aaPredicted RBP18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 NXPH2O95156 264 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 GLAP06280 429 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 FCGR3AP08637 254 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 OR3A3P47888 321 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 SORDQ00796 357 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 PRAMEF6Q5VXH4 476 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 FIP1L1Q6UN15 594 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 OR5AP2Q8NGF4 316 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 C12orf4Q9NQ89 552 aa18.2■□□□□ 0.5
TSPAN3-202ENST00000346495 MCRIP1C9JLW8 97 aa18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 CCNKO75909 580 aa18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 DUSP1P28562 367 aa18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 RRAS2P62070 204 aaPredicted RBP18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 CHRFAM7AQ494W8 412 aa18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 NCMAPQ5T1S8 102 aa18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 METTL11BQ5VVY1 283 aa18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 ARRDC1Q8N5I2 433 aa18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 GTF3AQ92664 365 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 ELMOD3Q96FG2 381 aa18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 HES4Q9HCC6 221 aa18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 KCNJ16Q9NPI9 418 aa18.19■□□□□ 0.5
TSPAN3-202ENST00000346495 SPTA1P02549 2419 aa18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 PCNX1Q96RV3 2341 aa18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 PTBP3O95758 552 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 IL5P05113 134 aa18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 CD300CQ08708 224 aa18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 OR13C8Q8NGS7 320 aa18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 MAFIPQ8WZ33 124 aa18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 DYRK2Q92630 601 aa18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 DACT3Q96B18 629 aaPredicted RBP18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 BEX2Q9BXY8 128 aa18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 OR51J1Q9H342 316 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms