RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 C1QL1O75973 258 aa11.55□□□□□ -0.56
CASC4-202ENST00000345795 NEURL1O76050 574 aa11.55□□□□□ -0.56
CASC4-202ENST00000345795 CALCRP30988 508 aa11.55□□□□□ -0.56
CASC4-202ENST00000345795 PP6455Q8WZ26 134 aa11.55□□□□□ -0.56
CASC4-202ENST00000345795 CHRNA10Q9GZZ6 450 aa11.55□□□□□ -0.56
CASC4-202ENST00000345795 RCL1Q9Y2P8 373 aaKnown RBP11.55□□□□□ -0.56
CASC4-202ENST00000345795 MUC22E2RYF6 1773 aaPredicted RBP11.55□□□□□ -0.56
CASC4-202ENST00000345795 CD300LBA8K4G0 201 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 IFNA2P01563 188 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 PTGS2P35354 604 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 GPR157Q5UAW9 335 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 ZSCAN4Q8NAM6 433 aaPredicted RBP11.54□□□□□ -0.56
CASC4-202ENST00000345795 OR13G1Q8NGZ3 307 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 SDSLQ96GA7 329 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 OR5AC2Q9NZP5 309 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 ZZEF1O43149 2961 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 LEUTXA8MZ59 168 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 CAMLGP49069 296 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 MRPS34P82930 218 aaKnown RBP11.54□□□□□ -0.56
CASC4-202ENST00000345795 TMEM128Q5BJH2 165 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 FAM76BQ5HYJ3 339 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 FAM27BQ5VT28 67 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 OR8G2PQ6IF36 304 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 HAS2Q92819 552 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 RRNAD1Q96FB5 475 aaKnown RBP11.54□□□□□ -0.56
CASC4-202ENST00000345795 SYT3Q9BQG1 590 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 UQCC2Q9BRT2 126 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 CHST5Q9GZS9 411 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 RHBDL1O75783 438 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 SCTP09683 121 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 P2RX3P56373 397 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 RPS27AP62979 156 aaKnown RBP11.54□□□□□ -0.56
CASC4-202ENST00000345795 ZNF169Q14929 603 aaPredicted RBP11.54□□□□□ -0.56
CASC4-202ENST00000345795 PRAMEF6Q5VXH4 476 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 C11orf87Q6NUJ2 197 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 ZBTB44Q8NCP5 570 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 FAM213BQ8TBF2 198 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 GLYATL2Q8WU03 294 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
CASC4-202ENST00000345795 ERRFI1Q9UJM3 462 aaPredicted RBP11.54□□□□□ -0.56
CASC4-202ENST00000345795 OR6C65A6NJZ3 312 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 SNRPGP15A8MWD9 76 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 THBS4P35443 961 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 KIRREL1Q96J84 757 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 OR10C1Q96KK4 312 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 PROK2Q9HC23 129 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 CTDSPLO15194 276 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 LSM6P62312 80 aaKnown RBP11.53□□□□□ -0.56
CASC4-202ENST00000345795 OR8G1Q15617 311 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 RPL7L1Q6DKI1 246 aaKnown RBP11.53□□□□□ -0.56
CASC4-202ENST00000345795 OR2A2Q6IF42 318 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 OR5AP2Q8NGF4 316 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 OPN3Q9H1Y3 402 aaPredicted RBP11.53□□□□□ -0.56
CASC4-202ENST00000345795 NECAP2Q9NVZ3 263 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 B3GNT2Q9NY97 397 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 SCGNO76038 276 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 CD80P33681 288 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 FAM189A2Q15884 450 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 ANKRD55Q3KP44 614 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 WFDC8Q8IUA0 241 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 ZFP82Q8N141 532 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 KCNRGQ8N5I3 272 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 PXT1Q8NFP0 134 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 OR2Z1Q8NG97 314 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 SLC25A28Q96A46 364 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 PIPOXQ9P0Z9 390 aa11.53□□□□□ -0.56
CASC4-202ENST00000345795 A0A1W2PPE3 182 aa11.52□□□□□ -0.56
CASC4-202ENST00000345795 PLSCR5A0PG75 271 aa11.52□□□□□ -0.56
CASC4-202ENST00000345795 MSGN1A6NI15 193 aa11.52□□□□□ -0.56
CASC4-202ENST00000345795 GABRA1P14867 456 aa11.52□□□□□ -0.56
CASC4-202ENST00000345795 AADACP22760 399 aa11.52□□□□□ -0.56
CASC4-202ENST00000345795 ZNF816Q0VGE8 651 aaPredicted RBP11.52□□□□□ -0.56
CASC4-202ENST00000345795 BTNL3Q6UXE8 466 aa11.52□□□□□ -0.56
CASC4-202ENST00000345795 FADS6Q8N9I5 356 aa11.52□□□□□ -0.56
CASC4-202ENST00000345795 NANOS1Q8WY41 292 aaKnown RBP11.52□□□□□ -0.56
CASC4-202ENST00000345795 C5orf66Q9H5L9 145 aa11.52□□□□□ -0.56
CASC4-202ENST00000345795 GNG12Q9UBI6 72 aa11.52□□□□□ -0.56
CASC4-202ENST00000345795 KRASP01116 189 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 PRB3Q04118 309 aaPredicted RBP11.52□□□□□ -0.57
CASC4-202ENST00000345795 TBC1D28Q2M2D7 210 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 RNFT1Q5M7Z0 435 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 VWA1Q6PCB0 445 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 SLC51BQ86UW2 128 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 CMTM1Q8IZ96 169 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 FBXO7Q9Y3I1 522 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 TMEM131Q92545 1883 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 IGHV3OR15-7A0A075B7D8 119 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 A0A1W2PNU3 283 aaPredicted RBP11.52□□□□□ -0.57
CASC4-202ENST00000345795 A0A1W2PNV4 684 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 OPN1MWP04001 364 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 OPN1MW2P0DN77 364 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 OPN1MW3P0DN78 364 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 POLR2GP62487 172 aaKnown RBP eCLIP11.52□□□□□ -0.57
CASC4-202ENST00000345795 PDZK1IP1Q13113 114 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 AANATQ16613 207 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 FAM201AQ5SY85 155 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 ZCCHC24Q8N2G6 241 aaKnown RBP11.52□□□□□ -0.57
CASC4-202ENST00000345795 OR1S2Q8NGQ3 325 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 OR1K1Q8NGR3 316 aa11.52□□□□□ -0.57
CASC4-202ENST00000345795 ANXA10Q9UJ72 324 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms