RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 OR51M1Q9H341 326 aa11.1□□□□□ -0.63
CLK3-201ENST00000345005 ESRP2Q9H6T0 727 aaKnown RBP11.1□□□□□ -0.63
CLK3-201ENST00000345005 DKK4Q9UBT3 224 aa11.1□□□□□ -0.63
CLK3-201ENST00000345005 PIGLQ9Y2B2 252 aa11.1□□□□□ -0.63
CLK3-201ENST00000345005 MEMO1Q9Y316 297 aa11.1□□□□□ -0.63
CLK3-201ENST00000345005 RHBDD3Q9Y3P4 386 aa11.1□□□□□ -0.63
CLK3-201ENST00000345005 LOC400499M0QZD8 3231 aa11.1□□□□□ -0.63
CLK3-201ENST00000345005 CEACAM18A8MTB9 384 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 RAB27BO00194 218 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 XRCC2O43543 280 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 CNOT4O95628 575 aaKnown RBP11.09□□□□□ -0.63
CLK3-201ENST00000345005 HLA-HP01893 362 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 HCKP08631 526 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 RAB1AP62820 205 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 TGFBR3Q03167 851 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 GUSBP1Q15486 140 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 LRRC37A5PQ49AS3 106 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 VAX1Q5SQQ9 334 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 HOGA1Q86XE5 327 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 KDF1Q8NAX2 398 aaPredicted RBP11.09□□□□□ -0.63
CLK3-201ENST00000345005 CHST4Q8NCG5 386 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 TERB2Q8NHR7 220 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 GLYATL2Q8WU03 294 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 NANOS1Q8WY41 292 aaKnown RBP11.09□□□□□ -0.63
CLK3-201ENST00000345005 DCUN1D4Q92564 292 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 BCL2L2Q92843 193 aaPredicted RBP11.09□□□□□ -0.63
CLK3-201ENST00000345005 NKX3-1Q99801 234 aaPredicted RBP11.09□□□□□ -0.63
CLK3-201ENST00000345005 C1QTNF5Q9BXJ0 243 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 DCAF16Q9NXF7 216 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 TMEM235A6NFC5 223 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 K7EM74 188 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 K7ENP7 123 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 IL18BPO95998 194 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 PRF1P14222 555 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 FAHP16930 419 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 VAMP1P23763 118 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 NKPD1Q17RQ9 610 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 ACSF3Q4G176 576 aaPredicted RBP11.09□□□□□ -0.63
CLK3-201ENST00000345005 PRSS54Q6PEW0 395 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 INO80CQ6PI98 192 aaPredicted RBP11.09□□□□□ -0.63
CLK3-201ENST00000345005 CD163Q86VB7 1156 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 ANGPTL5Q86XS5 388 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 SFT2D1Q8WV19 159 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 CHST5Q9GZS9 411 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 KCNK15Q9H427 330 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 TREM1Q9NP99 234 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 UQCC1Q9NVA1 299 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 LHX6Q9UPM6 363 aa11.09□□□□□ -0.63
CLK3-201ENST00000345005 INTS1Q8N201 2190 aaKnown RBP11.09□□□□□ -0.63
CLK3-201ENST00000345005 ACACBO00763 2458 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 LOC100509620A0A075B734 347 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 GPR31O00270 319 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 ZNHIT1O43257 154 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 PGAM2P15259 253 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 ECI1P42126 302 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 ARL6IP1Q15041 203 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 RNF212Q495C1 297 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 KRTCAP3Q53RY4 240 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 COLCA1Q6ZS62 124 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 KCTD9Q7L273 389 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 PNLDC1Q8NA58 520 aaKnown RBP11.08□□□□□ -0.64
CLK3-201ENST00000345005 OR10R2Q8NGX6 335 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 OR2AE1Q8NHA4 323 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 SSC4DQ8WTU2 575 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 ABHD17AQ96GS6 310 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 AQP10Q96PS8 301 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 GPER1Q99527 375 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 LPAR3Q9UBY5 353 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 ANAPC10Q9UM13 185 aa11.08□□□□□ -0.64
CLK3-201ENST00000345005 MRPS28Q9Y2Q9 187 aaKnown RBP11.08□□□□□ -0.64
CLK3-201ENST00000345005 ANKRD11Q6UB99 2663 aaPredicted RBP11.08□□□□□ -0.64
CLK3-201ENST00000345005 IGKV1-9A0A0C4DH69 117 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 EEF1E1-BLOC1S5C9J1V9 151 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 SERPINF1P36955 418 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 CAV2P51636 162 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 RAB5BP61020 215 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 ATXN7L3Q14CW9 347 aaPredicted RBP11.07□□□□□ -0.64
CLK3-201ENST00000345005 TBR1Q16650 682 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 Q3ZCU0 254 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 BEX5Q5H9J7 111 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 ZNF585AQ6P3V2 769 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 GCNT2Q8N0V5 402 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 COMMD1Q8N668 190 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 CNEP1R1Q8N9A8 125 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 C9orf106Q8NAJ2 232 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 OR4K15Q8NH41 348 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 SPSB4Q96A44 273 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 SMIM8Q96KF7 97 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 CNTNAP3Q9BZ76 1288 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 SMCO4Q9NRQ5 59 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 MYEF2Q9P2K5 600 aaKnown RBP11.07□□□□□ -0.64
CLK3-201ENST00000345005 ZZEF1O43149 2961 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 EPG5Q9HCE0 2579 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 TPRP12270 2363 aaKnown RBP11.07□□□□□ -0.64
CLK3-201ENST00000345005 C13orf42A0A1B0GVH6 325 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 C5orf49A4QMS7 147 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 ZNF503-AS2A6NEH8 195 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 ZNF705EA8MWA4 302 aaPredicted RBP11.07□□□□□ -0.64
CLK3-201ENST00000345005 CCSO14618 274 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 SFT2D2O95562 160 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms