RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ATG2BQ96BY7 2078 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 FITM1A5D6W6 292 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 M0R3E3 92 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OR3A4PP47883 348 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 PAQR6Q6TCH4 344 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OR1L8Q8NGR8 309 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TLNRD1Q9H1K6 362 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 GEMIN7Q9H840 131 aaKnown RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ASTLQ6HA08 431 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 PSAPL1Q6NUJ1 521 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OR4C13Q8NGP0 309 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ABHD3Q8WU67 409 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 MBOAT4Q96T53 435 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ALKQ9UM73 1620 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 LOC102725191A0A1B0GVB3 256 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TACR2P21452 398 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 IDSP22304 550 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ST3GAL2Q16842 350 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TECRLQ5HYJ1 363 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 SLC25A28Q96A46 364 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TNFRSF10CO14798 259 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 CD160O95971 181 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TRGC1P0CF51 173 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 C1QTNF8P60827 252 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 PLP2Q04941 152 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TWIST1Q15672 202 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 APOBEC3HQ6NTF7 200 aaKnown RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 RASL11AQ6T310 242 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OR10J6PQ8NGY7 276 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 HS3ST3A1Q9Y663 406 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 A0A1W2PRD5 423 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM50AO95807 157 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF93P35789 620 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 FCRLAQ7L513 359 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OR52B4Q8NGK2 314 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OR1N2Q8NGR9 330 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 FAM110BQ8TC76 370 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 FUBP1Q96AE4 644 aaKnown RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 GPATCH2LQ9NWQ4 482 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 QRICH2Q9H0J4 1663 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ODAMA1E959 279 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 SMIM20Q8N5G0 67 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OR2K2Q8NGT1 345 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 SPATC1LQ9H0A9 340 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 PRSS50Q9UI38 385 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 POLR2IP36954 125 aaKnown RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 SGSHP51688 502 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 GPR18Q14330 331 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 SLC5A8Q8N695 610 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 MAFAQ8NHW3 353 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 SLC38A5Q8WUX1 472 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 LOC102724200A0A096LPH7 203 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 GAGE12BA1L429 117 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 SERINC4A6NH21 518 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 CDC42EP2O14613 210 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 VSIG10L2P0DP72 767 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM164Q5U3C3 297 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 NOXRED1Q6NXP6 359 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OR10G3Q8NGC4 313 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 COA7Q96BR5 231 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 KLHDC3Q9BQ90 382 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 USP21Q9UK80 565 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 CRXO43186 299 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 DLX1P56177 255 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ZP1P60852 638 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 YBX1P67809 324 aaKnown RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 IZUMO4Q1ZYL8 232 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OTPQ5XKR4 325 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 OR10G9Q8NGN4 311 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 HES7Q9BYE0 225 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 hADV38S2A0JD32 116 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 DNAL4O96015 105 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 EFNB1P98172 346 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 C20orf27Q9GZN8 174 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 MED1Q15648 1581 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ANTXRLA6NF34 631 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 GP1BBP13224 206 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 RGNQ15493 299 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 C1QL3Q5VWW1 255 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 LYSMD4Q5XG99 296 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 LRRC75AQ8NAA5 344 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 NEU3Q9UQ49 428 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 ST3GAL6Q9Y274 331 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 MPDU1O75352 247 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 KIR2DL1P43626 348 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 RPS28P62857 69 aaKnown RBP3.37□□□□□ -1.87
SYNE2-202ENST00000344113 HIKESHIQ53FT3 197 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 LAIR1Q6GTX8 287 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 THYN1Q9P016 225 aa3.37□□□□□ -1.87
SYNE2-202ENST00000344113 FAM183AA6NL82 134 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 UFM1P61960 85 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 C2orf27AQ580R0 203 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 LCN10Q6JVE6 187 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 CMC1Q7Z7K0 106 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 KLHDC8AQ8IYD2 350 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 CD99L2Q8TCZ2 262 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 NUDT22Q9BRQ3 303 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TRBV20-1A0A075B6N2 111 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 FBLP22087 321 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 PCBD1P61457 104 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms