RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 KIR2DS1Q14954 304 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 HLA-DRB5Q30154 266 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 CLVS2Q5SYC1 327 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 TRAPPC6BQ86SZ2 158 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 RTN4RL2Q86UN3 420 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 OR8U1Q8NH10 309 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 TRMT10AQ8TBZ6 339 aaKnown RBP12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 SLAMF9Q96A28 289 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 MCUR1Q96AQ8 359 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 CADM1Q9BY67 442 aaKnown RBP12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 IGKV1-27A0A075B6S5 117 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 DHRS3O75911 302 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 HAND1O96004 215 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 IGHG2P01859 326 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 TTRP02766 147 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 H2AFXP16104 143 aaPredicted RBP12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 GABRR1P24046 479 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 DUSP1P28562 367 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 ARHGDIBP52566 201 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 SLC35B1P78383 322 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 CBX1P83916 185 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 SLC35E3Q7Z769 313 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 COMMD1Q8N668 190 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 OR56B4Q8NH76 319 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 CEP19Q96LK0 163 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 TTTY10Q9BZA0 68 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 PKIBQ9C010 78 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 DNAJB9Q9UBS3 223 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 UBE2J1Q9Y385 318 aaPredicted RBP12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 U3KQV3 271 aa12.8□□□□□ -0.36
NECTIN1-202ENST00000340882 ACOD1A6NK06 481 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 DLGAP1O14490 977 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 NDUFAB1O14561 156 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 CCNB2O95067 398 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 HCKP08631 526 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM106CPP0CH98 169 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 CALCBP10092 127 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 PEX2P28328 305 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 CD34P28906 385 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 OR3A1P47881 315 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 ESRRGP62508 458 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 DIAPH2-AS1Q14236 149 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 RBM39Q14498 530 aaKnown RBP12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 HNF4GQ14541 408 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 LCN1P1Q5VSP4 162 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 C16orf89Q6UX73 402 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 HEPN1Q6WQI6 88 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 THNSL2Q86YJ6 484 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 BBS1Q8NFJ9 593 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 OR14K1Q8NGZ2 314 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 V9GYS6 101 aa12.79□□□□□ -0.36
NECTIN1-202ENST00000340882 A0A1B0GTI1 187 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM230AA0A1W2PPH8 454 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 KRT36O76013 467 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 CEACAM3P40198 252 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 MNDAP41218 407 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 CDX1P47902 265 aaPredicted RBP12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 P2RX3P56373 397 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 ZNF91Q05481 1191 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 FHL3Q13643 280 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 OR52W1Q6IF63 320 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 TEX38Q6PEX7 206 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 DRAM1Q8N682 238 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 ITFG2Q969R8 447 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 NUFIP1Q9UHK0 495 aaKnown RBP12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 LAMP5Q9UJQ1 280 aa12.78□□□□□ -0.36
NECTIN1-202ENST00000340882 HMGB1P1B2RPK0 211 aaPredicted RBP12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 MGST3O14880 152 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 SRSF10O75494 262 aaKnown RBP12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 GMNNO75496 209 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 TMEM11P17152 192 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 NPBWR2P48146 333 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 ASPHD1Q5U4P2 390 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 EMG1Q92979 244 aaKnown RBP12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 NIPSNAP1Q9BPW8 284 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 TM2D3Q9BRN9 247 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 DGCR6LQ9BY27 220 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 SPAG4Q9NPE6 437 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 COPS3Q9UNS2 423 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 SLC7A11Q9UPY5 501 aa12.77□□□□□ -0.37
NECTIN1-202ENST00000340882 A0A1W2PPI3 338 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 TRIM64CA6NLI5 447 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 PRR23D1E9PI22 279 aaPredicted RBP12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 TOR1AO14656 332 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 ARPC2O15144 300 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 MAGEB4O15481 346 aaPredicted RBP12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 FGF16O43320 207 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 PRR23D2P0DMB1 279 aaPredicted RBP12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 ERP29P30040 261 aaKnown RBP12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 GLIPR1P48060 266 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 SNU13P55769 128 aaKnown RBP12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 HES1Q14469 280 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 UBE2V2Q15819 145 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 PNLIPRP3Q17RR3 467 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 CCDC144NLQ6NUI1 221 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 SLC25A26Q70HW3 274 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 FOXRED2Q8IWF2 684 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 RNF152Q8N8N0 203 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 CORO2AQ92828 525 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms