RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TRBV23-1A0A0A0MS06 115 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 ARPC4-TTLL3A0A0A6YYG9 625 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 NPIPB13A6NJU9 1138 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 NPIPB4C9JG80 1138 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 E5RGE8 158 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 H3BP45 60 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 NRASP01111 189 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 NAT2P11245 290 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF32P17041 273 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 GLP1RP43220 463 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 RBP2P50120 134 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 MAML2Q8IZL2 1156 aaPredicted RBP12.52□□□□□ -0.41
CPSF7-201ENST00000340437 PARP11Q9NR21 331 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 NSG2Q9Y328 171 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 KPTNQ9Y664 436 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 AKAP6Q13023 2319 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 IGHV5-10-1A0A0J9YXX1 117 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 SSSCA1O60232 199 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 CD5P06127 495 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 GNRHRP30968 328 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 TLE1Q04724 770 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 HGFACQ04756 655 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF468Q5VIY5 522 aaPredicted RBP12.52□□□□□ -0.41
CPSF7-201ENST00000340437 OR10AD1Q8NGE0 317 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 Q96M66 194 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 FRYQ5TBA9 3013 aa12.52□□□□□ -0.41
CPSF7-201ENST00000340437 H2AFB1P0C5Y9 115 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 IL15RAQ13261 267 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 PDZD11Q5EBL8 140 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 C10orf91Q5T1B1 145 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 SLC25A24Q6NUK1 477 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 SLC25A26Q70HW3 274 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 OR2G3Q8NGZ4 309 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 UBE2ZQ9H832 354 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-201ENST00000340437 SLC7A11Q9UPY5 501 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 CHCHD2Q9Y6H1 151 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-201ENST00000340437 MSTNO14793 375 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 ST8SIA3O43173 380 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 AADACP22760 399 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 EIF1P41567 113 aaKnown RBP12.51□□□□□ -0.41
CPSF7-201ENST00000340437 WDR74Q6RFH5 385 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-201ENST00000340437 VASH2Q86V25 355 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 NUDT16L1Q9BRJ7 211 aaKnown RBP12.51□□□□□ -0.41
CPSF7-201ENST00000340437 SRXN1Q9BYN0 137 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 NKX2-6A6NCS4 301 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 HSD17B6O14756 317 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 CXCL13O43927 109 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 SLC35G3Q8N808 338 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 UBALD1Q8TB05 177 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 TGIF2Q9GZN2 237 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 ADAMTS9Q9P2N4 1935 aa12.51□□□□□ -0.41
CPSF7-201ENST00000340437 A0A096LPE4 126 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 NSG1A0A0A6YYJ2 146 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 A0A1W2PPZ6 126 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 SNCAP37840 140 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 NPBWR2P48146 333 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 VAMP2P63027 116 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF695Q8IW36 515 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 GPR137CQ8N3F9 429 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 GHRLQ9UBU3 117 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 IGKV1-12A0A0C4DH73 117 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 IGKV1D-12P01611 117 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 CCL4P13236 92 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 CCL1P22362 96 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF133P52736 654 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-201ENST00000340437 RPS18P62269 152 aaKnown RBP12.5□□□□□ -0.41
CPSF7-201ENST00000340437 CCL20P78556 96 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 MALLQ13021 153 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 SOHLH1Q5JUK2 328 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 PRR18Q8N4B5 295 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 SUMF2Q8NBJ7 301 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 CADM4Q8NFZ8 388 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 RNASE11Q8TAA1 199 aaKnown RBP12.5□□□□□ -0.41
CPSF7-201ENST00000340437 TP53RKQ96S44 253 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF286AQ9HBT8 521 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 SULT1A1P50225 295 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 LSM6P62312 80 aaKnown RBP12.5□□□□□ -0.41
CPSF7-201ENST00000340437 RUNX1Q01196 453 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 TMEM187Q14656 261 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 NSUN5P2Q63ZY6 315 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 SLC16A14Q7RTX9 510 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 OSR2Q8N2R0 312 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 FGFBP3Q8TAT2 258 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 NAT6Q93015 286 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 PLEKHA2Q9HB19 425 aa12.5□□□□□ -0.41
CPSF7-201ENST00000340437 CEACAM18A8MTB9 384 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 WRBO00258 174 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 FABP1P07148 127 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 LYL1P12980 280 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 AAED1Q7RTV5 226 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 LGI3Q8N145 548 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 SYT3Q9BQG1 590 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 ANAPC10Q9UM13 185 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 C10orf142B7Z368 130 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 PDGFBP01127 241 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-201ENST00000340437 KLK3P07288 261 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-201ENST00000340437 ZNF92Q03936 586 aa12.49□□□□□ -0.41
CPSF7-201ENST00000340437 IZUMO4Q1ZYL8 232 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms